Gene detail information of Glyur001630s00027435 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07810.1 | 1.00E-44 | SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein |
| NR | XP_007157651.1 | 2.09E-96 | hypothetical protein PHAVU_002G087300g [Phaseolus vulgaris] |
| trEMBL | tr|V7CK47|V7CK47_PHAVU | 8.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:ESW29645.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01630 | 280 | 1048 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.015 |
| SRR1783600 | control | 2.224 |
| SRR1783602 | moderate drought stress | 1.597 |
| SRR1811619 | moderate drought stress | 1.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.314 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.158 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.905 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.784 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.482 |
| SRR2868004 | Drought Stress (root) | 1.575 |
| SRR2967015 | Control (root) | 2.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.561 |
| SRR9715740 | Leaf | 0.265 |
| SRR9715741 | Leaf | 1.161 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 4.106 |
| SRR9715743 | Root | 2.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.182 |
| SRR8749028 | MeJA induced 9h | 2.656 |
| SRR8749029 | MeJA induced 9h | 0.370 |
| SRR8749030 | Uninduced | 0.057 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.798 |
| SRR8400027 | Control - Root | 5.317 |