Gene detail information of Glyur001627s00031861 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32640.1 | 1.00E-172 | Lycopene beta/epsilon cyclase protein |
| NR | XP_004491132.1 | 0 | PREDICTED: uncharacterized protein LOC101498012 [Cicer arietinum] |
| COG | YP_007170912.1 | 1.00E-117 | hypothetical protein Dacsa_0807 [Dactylococcopsis salina PCC 8305] |
| trEMBL | tr|I1M7F1|I1M7F1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G05100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01627 | 23674 | 32132 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.330 |
| SRR1783600 | control | 1.225 |
| SRR1783602 | moderate drought stress | 1.461 |
| SRR1811619 | moderate drought stress | 1.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.760 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.868 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.747 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.671 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.685 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.807 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.234 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.582 |
| SRR2868004 | Drought Stress (root) | 2.137 |
| SRR2967015 | Control (root) | 1.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.735 |
| SRR9715740 | Leaf | 39.177 |
| SRR9715741 | Leaf | 19.312 |
| SRR9715739 | Root | 0.570 |
| SRR9715742 | Root | 0.840 |
| SRR9715743 | Root | 0.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.283 |
| SRR8749028 | MeJA induced 9h | 1.451 |
| SRR8749029 | MeJA induced 9h | 1.927 |
| SRR8749030 | Uninduced | 2.304 |
| SRR8749031 | Uninduced | 1.088 |
| SRR8749032 | Uninduced | 1.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.049 |
| SRR8400027 | Control - Root | 4.257 |