Gene detail information of Glyur001627s00031860 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05060.1 | 5.00E-60 | |
| NR | XP_003545560.1 | 1.63E-142 | PREDICTED: uncharacterized protein LOC100782670 [Glycine max] |
| trEMBL | tr|I1M7F0|I1M7F0_SOYBN | 6.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G05090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01627 | 20198 | 23357 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.081 |
| SRR1783600 | control | 14.030 |
| SRR1783602 | moderate drought stress | 13.865 |
| SRR1811619 | moderate drought stress | 13.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.560 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.280 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.959 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.941 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.254 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.132 |
| SRR2868004 | Drought Stress (root) | 31.034 |
| SRR2967015 | Control (root) | 21.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.123 |
| SRR9715740 | Leaf | 13.283 |
| SRR9715741 | Leaf | 12.436 |
| SRR9715739 | Root | 3.312 |
| SRR9715742 | Root | 14.294 |
| SRR9715743 | Root | 11.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.229 |
| SRR8749028 | MeJA induced 9h | 19.285 |
| SRR8749029 | MeJA induced 9h | 47.319 |
| SRR8749030 | Uninduced | 13.768 |
| SRR8749031 | Uninduced | 22.137 |
| SRR8749032 | Uninduced | 26.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.673 |
| SRR8400027 | Control - Root | 15.667 |