Gene detail information of Glyur001619s00026424 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43310.2 | 0 | COP1-interacting protein-related |
| NR | KHN30584.1 | 0 | hypothetical protein glysoja_030021 [Glycine soja] |
| trEMBL | tr|K7LK56|K7LK56_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G32560.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01619 | 9933 | 18131 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.655 |
| SRR1783600 | control | 37.448 |
| SRR1783602 | moderate drought stress | 84.181 |
| SRR1811619 | moderate drought stress | 83.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.159 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.097 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.770 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.830 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.334 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.253 |
| SRR2868004 | Drought Stress (root) | 33.917 |
| SRR2967015 | Control (root) | 43.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.426 |
| SRR9715740 | Leaf | 20.290 |
| SRR9715741 | Leaf | 15.303 |
| SRR9715739 | Root | 2.310 |
| SRR9715742 | Root | 14.636 |
| SRR9715743 | Root | 13.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.372 |
| SRR8749028 | MeJA induced 9h | 35.545 |
| SRR8749029 | MeJA induced 9h | 19.881 |
| SRR8749030 | Uninduced | 11.851 |
| SRR8749031 | Uninduced | 9.395 |
| SRR8749032 | Uninduced | 9.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.154 |
| SRR8400027 | Control - Root | 42.458 |