Gene detail information of Glyur001619s00026421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20450.1 | 5.00E-41 | Ribosomal protein L14 |
| NR | AFK37853.1 | 1.92E-60 | unknown [Lotus japonicus] |
| COG | YP_004893553.1 | 3.00E-09 | putative 50S ribosomal protein L14e [Thermoproteus tenax Kra 1] |
| Swissprot | tr|P55844|RL14_PEA | 2.00E-59 | Probable 60S ribosomal protein L14 |
| trEMBL | tr|I3T5Q5|I3T5Q5_LOTJA | 7.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:AFK47847.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01619 | 474 | 3900 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001619s00026421.1 | PF01929.12 | Ribosomal_L14e | 118 | 169 | 4.80E-15 |
| Glyur001619s00026421.2 | PF01929.12 | Ribosomal_L14e | 45 | 96 | 1.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.009 |
| SRR1783600 | control | 18.602 |
| SRR1783602 | moderate drought stress | 18.985 |
| SRR1811619 | moderate drought stress | 17.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.340 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 68.344 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.984 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.844 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.414 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.779 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 127.335 |
| SRR2868004 | Drought Stress (root) | 80.542 |
| SRR2967015 | Control (root) | 76.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.859 |
| SRR9715740 | Leaf | 40.487 |
| SRR9715741 | Leaf | 37.883 |
| SRR9715739 | Root | 71.869 |
| SRR9715742 | Root | 58.314 |
| SRR9715743 | Root | 63.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 137.484 |
| SRR8749028 | MeJA induced 9h | 34.470 |
| SRR8749029 | MeJA induced 9h | 76.933 |
| SRR8749030 | Uninduced | 10.262 |
| SRR8749031 | Uninduced | 5.040 |
| SRR8749032 | Uninduced | 18.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 96.050 |
| SRR8400027 | Control - Root | 83.937 |