Gene detail information of Glyur001615s00039987 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08600.1 | 2.00E-48 | Protein of unknown function (DUF1191) |
| NR | XP_003552332.1 | 6.31E-126 | PREDICTED: uncharacterized protein LOC100818010 [Glycine max] |
| trEMBL | tr|I1N3C2|I1N3C2_SOYBN | 2.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G45000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01615 | 46977 | 47840 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001615s00039987.1 | PF06697.7 | DUF1191 | 7 | 279 | 9.50E-91 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.199 |
| SRR1783600 | control | 9.510 |
| SRR1783602 | moderate drought stress | 8.493 |
| SRR1811619 | moderate drought stress | 8.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.825 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.577 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.406 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.414 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.423 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.283 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.061 |
| SRR2868004 | Drought Stress (root) | 13.104 |
| SRR2967015 | Control (root) | 11.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.301 |
| SRR9715740 | Leaf | 9.785 |
| SRR9715741 | Leaf | 6.952 |
| SRR9715739 | Root | 15.574 |
| SRR9715742 | Root | 9.941 |
| SRR9715743 | Root | 9.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.315 |
| SRR8749028 | MeJA induced 9h | 4.734 |
| SRR8749029 | MeJA induced 9h | 5.440 |
| SRR8749030 | Uninduced | 1.286 |
| SRR8749031 | Uninduced | 0.056 |
| SRR8749032 | Uninduced | 1.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.953 |
| SRR8400027 | Control - Root | 11.500 |