Gene detail information of Glyur001610s00030573 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11210.1 | 6.00E-51 | SGNH hydrolase-type esterase superfamily protein |
| NR | XP_004492452.1 | 1.19E-133 | PREDICTED: GDSL esterase/lipase CPRD49-like [Cicer arietinum] |
| Swissprot | tr|Q9SRM5|CPR49_ARATH | 4.00E-80 | GDSL esterase/lipase CPRD49 (Precursor) |
| trEMBL | tr|A0A072U067|A0A072U067_MEDTR | 5.00E-132 | GDSL-like lipase/acylhydrolase {ECO:0000313|EMBL:KEH23169.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01610 | 56813 | 59778 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001610s00030573.1 | PF00657.17 | Lipase_GDSL | 73 | 153 | 3.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.259 |
| SRR1783600 | control | 0.219 |
| SRR1783602 | moderate drought stress | 0.054 |
| SRR1811619 | moderate drought stress | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.155 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.788 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 184.577 |
| SRR2868004 | Drought Stress (root) | 340.070 |
| SRR2967015 | Control (root) | 187.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.733 |
| SRR9715740 | Leaf | 4.789 |
| SRR9715741 | Leaf | 18.397 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.199 |
| SRR9715743 | Root | 0.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.264 |
| SRR8400027 | Control - Root | 63.906 |