Gene detail information of Glyur001607s00029756 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39230.1 | 6.00E-109 | NmrA-like negative transcriptional regulator family protein |
| NR | BAF34843.1 | 6.77E-153 | pterocarpan reductase [Lotus japonicus] |
| Swissprot | tr|E1U332|ALL12_OLEEU | 6.00E-139 | Isoflavone reductase-like protein |
| trEMBL | tr|Q05JY1|Q05JY1_LOTJA | 3.00E-153 | Pterocarpan reductase {ECO:0000313|EMBL:BAF34843.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01607 | 61695 | 64328 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001607s00029756.1 | PF05368.8 | NmrA | 8 | 162 | 1.00E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.565 |
| SRR1783600 | control | 13.860 |
| SRR1783602 | moderate drought stress | 7.515 |
| SRR1811619 | moderate drought stress | 7.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.235 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.621 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.272 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.328 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.244 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.299 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.690 |
| SRR2868004 | Drought Stress (root) | 5.578 |
| SRR2967015 | Control (root) | 5.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.189 |
| SRR9715740 | Leaf | 1.918 |
| SRR9715741 | Leaf | 1.973 |
| SRR9715739 | Root | 8.019 |
| SRR9715742 | Root | 2.559 |
| SRR9715743 | Root | 3.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.047 |
| SRR8749028 | MeJA induced 9h | 0.029 |
| SRR8749029 | MeJA induced 9h | 0.337 |
| SRR8749030 | Uninduced | 0.363 |
| SRR8749031 | Uninduced | 1.205 |
| SRR8749032 | Uninduced | 0.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.590 |
| SRR8400027 | Control - Root | 11.975 |