Gene detail information of Glyur001607s00029752 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16365.2 | 2.00E-27 | F-box family protein |
| NR | XP_003539014.1 | 0 | PREDICTED: F-box protein At2g16365-like isoform X1 [Glycine max] |
| Swissprot | tr|Q84V03|FB348_ARATH | 7.00E-29 | F-box protein At2g16365 |
| trEMBL | tr|K7LP91|K7LP91_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G12421.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01607 | 44380 | 47857 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.581 |
| SRR1783600 | control | 10.561 |
| SRR1783602 | moderate drought stress | 9.097 |
| SRR1811619 | moderate drought stress | 9.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.774 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.653 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.756 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.403 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.718 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.502 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.368 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.246 |
| SRR2868004 | Drought Stress (root) | 34.160 |
| SRR2967015 | Control (root) | 32.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.854 |
| SRR9715740 | Leaf | 57.808 |
| SRR9715741 | Leaf | 49.718 |
| SRR9715739 | Root | 2.275 |
| SRR9715742 | Root | 9.212 |
| SRR9715743 | Root | 7.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.453 |
| SRR8749028 | MeJA induced 9h | 18.432 |
| SRR8749029 | MeJA induced 9h | 18.320 |
| SRR8749030 | Uninduced | 15.390 |
| SRR8749031 | Uninduced | 14.328 |
| SRR8749032 | Uninduced | 8.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.044 |
| SRR8400027 | Control - Root | 7.736 |