Gene detail

Gene detail information of Glyur001601s00027178

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G37460.1	3.00E-111	nodulin MtN21 /EamA-like transporter family protein
NR	XP_004493899.1	0	PREDICTED: WAT1-related protein At2g37460-like isoform X2 [Cicer arietinum]
Swissprot	tr\|Q9ZUS1\|WTR13_ARATH	7.00E-137	WAT1-related protein At2g37460
trEMBL	tr\|V7D0J2\|V7D0J2_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34666.1}

Sequence

Transcript Sequence

>Glyur001601s00027178.1
ATGGATGGTTATAGCCAAAAAAGGTTTGACAGAGCCAAGCCATTCATAGGTGTGGTGTTCTTGCAATTTGGATTTGCTGGTATGGATGTTCTATCCAAGGCTGCACTGAACAAGGGAATGAGCAACTACGTACTCGTCGTCTACCGCCACGCCGAAAGTAAGGCCAAAGATGACATTGTCAATCTTTATGAAGATAGTGGCGCTCAGCATACTAGATACACAACAGCAACTTTTGCCGTTGCTATGCTCAATATCCTTCCTGCCATTACCTTTGTCATGGCTTGCATTCTTAAACTTGAGAGGATAAAAATAAAAAGTACACGGAGTCAAGCGAAGGTAGTTGGGACTTTAGCCACTGTTGCAGGTGCCANGGTCATGACATTGATAAAAGGCCCAGTACTTGGGCTTTTTGGGACACACGGAAGCAATAATACCCAAAACCAGCATAGTGGTGGGGTCAATCTTCAACATTCAATTAAGGGATCAGTGATGATCACAATTGGCTGTTTTAGTTGTGCTTGCTTCATGGTTCTCCAAGCTATTACCCTTGAATCCTACCCTGCAGAGCTCTCTCTTACTGCATGGATATGCCTATTGGGAACAGTTGAAGGTGGCATAGTGGCTTTGATTATGGAAAGGGGTAACCCTTCGGTTTGGTCATTGAATTGGGATACAAAACTTCTGGCCGCTGTCTACAGTGGCATTGTTTGCTCAGGAATGGCCTATTACATTCAAGGAGCAGTGATGAAATATAGAGGCCCAGTCTTTGTAACAACTTTTAATCCCCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTATTTTTGGCCGAGAAAATTTTCCTTGGAAGGGTGATTGGTGCCATTGTCATTATTTTAGGACTGTATCTAGTGGTATGGGGTAAAAGCAATGATTACAATTCACCAACAAGTCCAATTACTGAAGAAATTATATCACCAGCTAAAGTAACTGCAGAGAGCAATGGCAAAGAAGAGCATTCTAATCATGAGGTCATCACTATCAGTAACCTTGGTGCAGGAAACATATGAGGAAACACACTGAAATTTAATCTAAACTTGTGTTATCCTATGATATTCCACTTCAATTAACCGTCCAAATGTCTATTTAACAACAGCAACTATATATAGGTCCCTAGTTGTTTTATCTTTCATTTTGATGTAATAGTCGAGGTTTTTGATGTAACAGTATGCTATGACAATAAGACAGCAAAAATACCATCAAAAGAAGACGTGATAACTTTGATGCAGAGCTTTCTATCAAGTATTACTTAAAAACAACTAGATGGTTCAGAGGTTGGAGATATATTCCAATCAACTAGCTCCCATATTAGTTAACTTCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01601	49570	53208	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0022857 transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001601s00027178.1	PF00892.15	EamA	170	299	3.20E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.564
SRR1783600	control	12.270
SRR1783602	moderate drought stress	13.213
SRR1811619	moderate drought stress	13.353

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	35.663
DRR006520	Root Summer glycyrrhizin high producing strain	34.824
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	26.599
DRR006524	Root Summer glycyrrhizin low producing strain	26.749
DRR006525	Leaf Summer glycyrrhizin high producing strain	56.086
DRR006526	Leaf Summer glycyrrhizin high producing strain	55.446

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.396
SRR2868004	Drought Stress (root)	35.043
SRR2967015	Control (root)	26.885

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	34.017
SRR9715740	Leaf	63.498
SRR9715741	Leaf	49.727
SRR9715739	Root	1.254
SRR9715742	Root	9.582
SRR9715743	Root	7.402

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.003
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.028
SRR8749030	Uninduced	0.004
SRR8749031	Uninduced	0.065
SRR8749032	Uninduced	0.039

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.653
SRR8400027	Control - Root	3.941