Gene detail information of Glyur001601s00027174 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22930.1 | 8.00E-07 | Protein of unknown function (DUF1635) |
| NR | KHN09439.1 | 3.15E-124 | hypothetical protein glysoja_016538 [Glycine soja] |
| trEMBL | tr|K7MYW1|K7MYW1_SOYBN | 1.00E-118 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G35790.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01601 | 18529 | 20143 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001601s00027174.1 | PF07795.6 | DUF1635 | 7 | 225 | 5.20E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.599 |
| SRR1783600 | control | 4.364 |
| SRR1783602 | moderate drought stress | 3.354 |
| SRR1811619 | moderate drought stress | 3.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.690 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.297 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.225 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.241 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.987 |
| SRR2868004 | Drought Stress (root) | 12.750 |
| SRR2967015 | Control (root) | 13.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.238 |
| SRR9715740 | Leaf | 0.057 |
| SRR9715741 | Leaf | 0.103 |
| SRR9715739 | Root | 0.825 |
| SRR9715742 | Root | 1.435 |
| SRR9715743 | Root | 1.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.855 |
| SRR8749028 | MeJA induced 9h | 0.071 |
| SRR8749029 | MeJA induced 9h | 0.059 |
| SRR8749030 | Uninduced | 0.460 |
| SRR8749031 | Uninduced | 0.425 |
| SRR8749032 | Uninduced | 0.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.247 |
| SRR8400027 | Control - Root | 13.918 |