Gene detail information of Glyur001600s00030357 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29170.1 | 1.00E-84 | Mnd1 family protein |
| NR | XP_003517991.1 | 5.05E-146 | PREDICTED: meiotic nuclear division protein 1 homolog [Glycine max] |
| Swissprot | tr|Q8GYD2|MND1_ARATH | 4.00E-123 | Meiotic nuclear division protein 1 homolog |
| trEMBL | tr|I1J4E4|I1J4E4_SOYBN | 2.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01600 | 58696 | 60805 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001600s00030357.1 | PF03962.10 | Mnd1 | 16 | 205 | 6.20E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.155 |
| SRR1783600 | control | 1.160 |
| SRR1783602 | moderate drought stress | 0.979 |
| SRR1811619 | moderate drought stress | 1.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.510 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.826 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.829 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.896 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.304 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.154 |
| SRR2868004 | Drought Stress (root) | 3.096 |
| SRR2967015 | Control (root) | 3.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.472 |
| SRR9715740 | Leaf | 1.094 |
| SRR9715741 | Leaf | 0.353 |
| SRR9715739 | Root | 0.674 |
| SRR9715742 | Root | 0.676 |
| SRR9715743 | Root | 1.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.421 |
| SRR8749028 | MeJA induced 9h | 6.306 |
| SRR8749029 | MeJA induced 9h | 6.852 |
| SRR8749030 | Uninduced | 0.410 |
| SRR8749031 | Uninduced | 1.141 |
| SRR8749032 | Uninduced | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.742 |
| SRR8400027 | Control - Root | 4.289 |