Gene detail

Gene detail information of Glyur001598s00038295.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G31500.1	8.00E-95	cytochrome P450, family 83, subfamily B, polypeptide 1
NR	XP_007134003.1	2.50E-167	hypothetical protein PHAVU_010G010900g [Phaseolus vulgaris]
COG	YP_004035232.1	5.00E-15	cytochrome p450 [Halogeometricum borinquense DSM 11551]
Swissprot	tr\|O65782\|C83B1_ARATH	6.00E-114	Cytochrome P450 83B1
trEMBL	tr\|V7AK63\|V7AK63_PHAVU	9.00E-168	Uncharacterized protein {ECO:0000313\|EMBL:ESW05997.1}

Sequence

Transcript Sequence

>Glyur001598s00038295.1
ATGGAGTCACTTGTTGCACTCACATTCCTTTCTCTTCCGGTGTTTCTATTCTTCTTCTTCCTCCTCCTCCAAAACCATAGATCCACAAGGAACCCAACACACCCTCCAGGTCCTAAAGGCCTTCCTATAATCGGAAATCTTCACCAACTGCATAACAATTCCACCACCCTTCATTCGCAGCTGTGGAAATTCTCAAAGAAATATGGCCCCTTGTTTTCACTCCAACTCGGTTCAAGGCCTTGTCTTGTTGTCTCTTCCACAACAATGGCCCAATTGGTACTTAAAATCCATGACCTTGAGTTCTGTGGAAGACCATCTTTTCTAAGCCAACGGAAACTTTCCTACAATAGGGTTGAGGTAGCATTTTCCCCTTACAACGATTCTTGGAGAGCAATAAAAAAAATCTGCACTTTCCACATCTTTAACTCGACCCGTGTCTCAGGCTTCTCCTCTATAAGAAAAATTGAGGTTAACCGAATGATCCAAAAGATATCAGTGCTGGCTGCTTCTTCAAAAGCTGCGAACTTGAGTGAATTGGTGATGTCTCTTACAAACACTATAATTTGTAAGATTGCTTTTGGGAGAAGAAGTTGTGAAGAGGAAGGGAAAAGTACCAATGGAATCCTTAGCATTCTTAATGAATCGCAGGCCTTGATGGGTACACGCTTTGTCTCTGATTTTATTCCTTTCATGGGTTGGATTGATAGACTCAGAGGACTGCACGACCGTCTTGAGAGGAACTTCAAGGAGATGGATGCGTTTTTGCAAGAAGTGGTCCACCAACACCTTGATGATGATACAAATGGACAAAAATCACAACATGATGAAGAGGACATCGTGGATGTTTTATTGAAGTTGAAGAAGCAGAACTCGTTTTCATTTGATCTCACTTATGATCAAATCAAAGCTGTGCTCCTGGATATGCTCGTTGGAGGAACATATTCAAGTGCTGCCACAGTAATTTGGGCTATGACCAAACTAATGGAAAACCCCATATCAATGATGAAAGTTCAAACAGAGGTTAGGAATTGGTATGGGAACAGAGGCTTTGTTGATGAAGATGGCATCCAAAACCTTTCCTATCTTAAGGCAACATTAGTGTATGTGAATGCATGGGCCATTCAAAGGGATCCTGAAGTTTGGAAAGAACCAGAAGAGTTCTGTCCCGAGAGATTCTTAGAGAGGAGAAGGATTTGCCCAGGTTTACAATTGGGAATGGTCACAGTGGAGATAATACTTGCAAACCTTCTTTATATGTATGATTGGGAAATGCCTGCTATGATGGAAAATAAAGACAATACAAACAGTCAGGTGCAGCCAGCACTTGTCCAATACAAGAAGAATTCTCTTTATCTTGTGCCCAAGAATCATATCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01598	4901	6996	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B35

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001598s00038295.1	PF00067.17	p450	35	366	7.60E-45
Glyur001598s00038295.1	PF00067.17	p450	364	436	3.90E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.639
SRR1783600	control	1.744
SRR1783602	moderate drought stress	12.316
SRR1811619	moderate drought stress	12.659

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.275
DRR006520	Root Summer glycyrrhizin high producing strain	1.384
DRR006521	Root Winter glycyrrhizin high producing strain	0.051
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.067
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.085

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.210
SRR2868004	Drought Stress (root)	0.093
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.522
SRR9715740	Leaf	0.800
SRR9715741	Leaf	0.957
SRR9715739	Root	0.204
SRR9715742	Root	9.339
SRR9715743	Root	6.839

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.089
SRR8400027	Control - Root	1.499