Gene detail information of Glyur001594s00035831 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38310.1 | 9.00E-61 | PYR1-like 4 |
| NR | XP_003604555.1 | 2.49E-103 | Abscisic acid receptor PYL4 [Medicago truncatula] |
| Swissprot | tr|O80920|PYL4_ARATH | 8.00E-76 | Abscisic acid receptor PYL4 |
| trEMBL | tr|G7JKP6|G7JKP6_MEDTR | 9.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:AFK43729.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01594 | 25571 | 26236 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001594s00035831.1 | PF10604.4 | Polyketide_cyc2 | 67 | 206 | 4.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 116.967 |
| SRR1783600 | control | 114.937 |
| SRR1783602 | moderate drought stress | 115.139 |
| SRR1811619 | moderate drought stress | 114.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.013 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.178 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.799 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.216 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.255 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.188 |
| SRR2868004 | Drought Stress (root) | 84.413 |
| SRR2967015 | Control (root) | 91.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.987 |
| SRR9715740 | Leaf | 28.210 |
| SRR9715741 | Leaf | 25.489 |
| SRR9715739 | Root | 47.418 |
| SRR9715742 | Root | 18.406 |
| SRR9715743 | Root | 20.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.805 |
| SRR8749028 | MeJA induced 9h | 0.789 |
| SRR8749029 | MeJA induced 9h | 9.756 |
| SRR8749030 | Uninduced | 2.093 |
| SRR8749031 | Uninduced | 17.204 |
| SRR8749032 | Uninduced | 16.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.945 |
| SRR8400027 | Control - Root | 27.790 |