Gene detail information of Glyur001590s00038735 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54400.1 | 2.00E-15 | HSP20-like chaperones superfamily protein |
| NR | KHN34675.1 | 8.47E-61 | hypothetical protein glysoja_011228 [Glycine soja] |
| Swissprot | tr|D9UC01|RTM2D_ARATH | 8.00E-15 | Inactive protein RESTRICTED TEV MOVEMENT 2 |
| trEMBL | tr|V7CXF7|V7CXF7_PHAVU | 5.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:ESW33970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01590 | 26984 | 28737 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.504 |
| SRR1783600 | control | 0.507 |
| SRR1783602 | moderate drought stress | 0.652 |
| SRR1811619 | moderate drought stress | 0.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.638 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.499 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.615 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.041 |
| SRR2868004 | Drought Stress (root) | 5.250 |
| SRR2967015 | Control (root) | 5.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.567 |
| SRR9715740 | Leaf | 0.197 |
| SRR9715741 | Leaf | 0.927 |
| SRR9715739 | Root | 0.169 |
| SRR9715742 | Root | 0.921 |
| SRR9715743 | Root | 2.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.219 |
| SRR8749031 | Uninduced | 0.395 |
| SRR8749032 | Uninduced | 0.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.832 |
| SRR8400027 | Control - Root | 1.949 |