Gene detail information of Glyur001577s00033503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47510.1 | 4.00E-04 | |
| NR | KHN46726.1 | 2.97E-27 | hypothetical protein glysoja_014977 [Glycine soja] |
| trEMBL | tr|I1MKV6|I1MKV6_SOYBN | 2.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G03960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01577 | 45284 | 47355 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.251 |
| SRR1783600 | control | 18.847 |
| SRR1783602 | moderate drought stress | 28.626 |
| SRR1811619 | moderate drought stress | 28.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 360.169 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 353.887 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 68.518 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.322 |
| SRR2868004 | Drought Stress (root) | 51.629 |
| SRR2967015 | Control (root) | 55.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.011 |
| SRR9715740 | Leaf | 36.161 |
| SRR9715741 | Leaf | 65.124 |
| SRR9715739 | Root | 7.419 |
| SRR9715742 | Root | 40.386 |
| SRR9715743 | Root | 29.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 222.899 |
| SRR8749028 | MeJA induced 9h | 260.130 |
| SRR8749029 | MeJA induced 9h | 240.822 |
| SRR8749030 | Uninduced | 138.155 |
| SRR8749031 | Uninduced | 41.879 |
| SRR8749032 | Uninduced | 211.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.390 |
| SRR8400027 | Control - Root | 18.600 |