Gene detail information of Glyur001573s00037105 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69080.1 | 1.00E-43 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_006574376.1 | 6.46E-138 | PREDICTED: uncharacterized protein LOC100527708 isoform X1 [Glycine max] |
| trEMBL | tr|I1JEJ0|I1JEJ0_SOYBN | 2.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01573 | 41622 | 43295 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001573s00037105.1 | PF00582.21 | Usp | 123 | 261 | 4.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.562 |
| SRR1783600 | control | 2.488 |
| SRR1783602 | moderate drought stress | 3.474 |
| SRR1811619 | moderate drought stress | 3.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.243 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.831 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.528 |
| SRR2868004 | Drought Stress (root) | 9.327 |
| SRR2967015 | Control (root) | 8.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.853 |
| SRR9715740 | Leaf | 0.505 |
| SRR9715741 | Leaf | 0.369 |
| SRR9715739 | Root | 0.260 |
| SRR9715742 | Root | 1.229 |
| SRR9715743 | Root | 1.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.429 |
| SRR8400027 | Control - Root | 22.965 |