Gene detail information of Glyur001572s00035824 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007140379.1 | 5.11E-40 | hypothetical protein PHAVU_008G106800g [Phaseolus vulgaris] |
| trEMBL | tr|V7B6A0|V7B6A0_PHAVU | 2.00E-40 | Uncharacterized protein {ECO:0000313|EMBL:ESW12373.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01572 | 28570 | 28968 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.458 |
| SRR1783600 | control | 7.988 |
| SRR1783602 | moderate drought stress | 5.845 |
| SRR1811619 | moderate drought stress | 6.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.127 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.536 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.086 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.277 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.117 |
| SRR2868004 | Drought Stress (root) | 2.339 |
| SRR2967015 | Control (root) | 2.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.407 |
| SRR9715740 | Leaf | 0.159 |
| SRR9715741 | Leaf | 0.110 |
| SRR9715739 | Root | 1.289 |
| SRR9715742 | Root | 1.611 |
| SRR9715743 | Root | 1.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.429 |
| SRR8400027 | Control - Root | 12.606 |