Gene detail information of Glyur001571s00028317 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK48739.1 | 3.06E-25 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T897|I3T897_LOTJA | 1.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:AFK48739.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01571 | 30607 | 32824 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.548 |
| SRR1783600 | control | 9.160 |
| SRR1783602 | moderate drought stress | 8.221 |
| SRR1811619 | moderate drought stress | 7.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.760 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.422 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.552 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.620 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.563 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.671 |
| SRR2868004 | Drought Stress (root) | 3.548 |
| SRR2967015 | Control (root) | 4.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.634 |
| SRR9715740 | Leaf | 0.157 |
| SRR9715741 | Leaf | 0.486 |
| SRR9715739 | Root | 0.001 |
| SRR9715742 | Root | 0.955 |
| SRR9715743 | Root | 0.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.224 |
| SRR8749028 | MeJA induced 9h | 0.940 |
| SRR8749029 | MeJA induced 9h | 0.322 |
| SRR8749030 | Uninduced | 0.128 |
| SRR8749031 | Uninduced | 0.089 |
| SRR8749032 | Uninduced | 0.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.747 |
| SRR8400027 | Control - Root | 5.699 |