Gene detail

Gene detail information of Glyur001571s00028313

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G44730.1	kinesin-like protein 1
NR	XP_010103965.1	hypothetical protein L484_020218 [Morus notabilis]
Swissprot	tr\|Q8W1Y3\|KP1_ARATH	Kinesin KP1
trEMBL	tr\|W9RXZ4\|W9RXZ4_9ROSA	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur001571s00028313.1
ATGCCTCAGGAGAGCATACCAAACTCCTTTTTCACATCTCCTTCAAAGAGAGGATTGAATTTGAAGGGTTCGGTGTTTAGTAACAGTGAGGCTTATTCATTCACTGGGACGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCGTCAAGGAGGAATGAAGCAGCAGAATGGCTTCGGGAGATGGACGATGGCGCGTGTGCATCACTCTCCAAAGAACCCTCCGAAGAAGAATTCTGTCTCGCTCTCCGCAATGGCCTCATTCTCTGCAACNTCCTCAACAAAGTCAATCCCGGTGCTGTCCTCAAGGTGGTGGAGAATCCCGTCATTGCGATTCAGTCTGCAGAGGGAGCTGCCCACTCTGCCATTCAGTACTTCGAGAATATGAAGAATTTCCTGGATGCCGTTAAGGCTATGACGCTTTTGACGTTTGAAGCTTCCGATTTGGAAAAGGGGGGTTCATCGAGTAAAGTTGTGGACTGCATTCTTTGTTTGAAAGGGTATTATGAATGGAAGCTATCGGGTGGAGTTGGGGTTTGGAGGTATGGAGGGACTGTGAGGATTACTTCCTTCCCCAAGGGAACTCCTTCCTCCACAGTGGGCAGTGAAAGTGCTGATGAGTCTCGGTCGCCACAGTATGACCAGCTACTTGAGTTTCTAAATCTCTCTCAAGAGGTCTCAATTGAAGAAACCAGAACTGTTAATGCTCTGGCTTCCCTGTTTGATCAATTCGGACTCAAACTTCTCCAGGCTTACCTCAGAGAGACTGATGGGGTTGAAGATCTGCCTCTCAATGCAATGGTAATTGATACTNTGCTCAGCAAGATAGTCCGGGATTTTTCTGCGTTGCTTGTTTCTCAAGGCACTCAGCTTGGACTTTTCCTCAAGAAAATATTGAAAGGAGGTGTCGGTTGCCTCTCTAAGAGAGAATTTGTGGAAGCTATCACATTATATCTTAATCAAAGAAGTAGTTTGGCATTGAATGATTTTTCTAAATTCTGCACTTGTGGCGGAAAACTTGATAGTACTCAGCACAATGTCAATTACTCTGCCAAGCATGCTGAAATAATTGATGCTCAGCAGAAACAACTTGAGGGAATGAAATACTTCTTTGAAGAGTTAAAACTGGAGGTGAAGAAGATTCAATATGCATGGGACCAAGAACTGAGTAGGCTTGAGAATCATATAAAGAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTAGAGGAGAACCGCTCTCTTTACAATCAAGTGCAAGACCTGAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGGCCCTTCTTACCAGGGCAACCAAATGGACAATCTTCAGTAGATTATATAGGAGAAAATGGAAACATAATGATTTTGAATCCCCTTAAGCAGGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAATGCCACACAAGAACAAATATATGGTGATACTCAACCATTGGTCAGATCCGCTTTAGATGGCTACAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGAAAGACCTACACAATGAGTGGCCCTGATCTGATGACTGAAGAAACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTGTTTCAAATATCAAAGGAAAGAGCAGATGCCATAAAATATGAAAGGAACCGTGCTGTGGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAATTTCTAACTCTGTCCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGATAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATTAATAAATCTCTTTCTGCTCTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAATAGCAAGCTTACACAAGTTTTACAAGATTCTTTAGGTGGCCATGCAAAAACTTTGATGTTTGTCCATATAAATCCTGAACTCAATGCTCTTGGGGAGACAATTAGCACATTGAAGTTTGCTGAGAGGGTTGCATCCATTGAACTTGGGGCTGCTAAATCGAATAAAGAAACTGGTGAAATCCGAGAGCTAAAGGAAGAGATATCAAATATCAAATTAGCATTGGAGAGGAAGGAAACTGAACTCGAGCAATGGAAATCTGGGAATGCACGGAATGCTACAGAATCTCAGAAACCAAGAGCGGTTTCACCTTTTCGTTTGCCCAAAAATGGTACTACCAGTGGCAGCATGAAGCCTGAAAATTGTCAAAGATCCATGGATGATAGAAGCTCTGAGGCTAAAAGTTGTTCTTCAGGTAAGCAAAGAAGGTCAAGATTTCCCTCAAAATTTATGGACAAGGACTCCATGCCAAAAATGTCTCTTCTGGCTGAAGAAAAATCAGTGAGCTCAGGGAAGGGTAGATCACCATCACCTCCAATAAGGAGATCAATATCAACTGATAGAGGGTCTGTCATTAAAAGCAAGGTCAAAATTGACATATCAGACAACCAACCAATATTAAAGCATCCANTTCCAGCTAGAGTACCAGTGAATAAATCCCTCATCACAGTGACAATGTCCCCATCTACAGACAATAACTCAAGGGTGCATGTGCATTCACAAGAGCCAGTGAAGCTGGACAACATATCTGAACCTCACTTCAACCTCCCGAATGTAAACTCCAGGAAAGCTCATCAAGAACATGAAGAAGAACAGTTCAAGCAACCATTTGGGGTAGTAAGACAAGGTGGTGTTAGTGTTAGGAAAAGCAAGAATGATAATAAGGCCAAGGTCAAGCATCATCAGCAATTGCCCTTTAGGATTCAAAAGGCTGATCTGATACCTACATTGATTCNTGACATGGAAATTGCTAATGTGGAGGCACCTCAAAAGAGTGATTACTTTGAGCCAGAAAATGATATTGGCCTTATGGAGCATGCAGTCCACGAATCTGTGACATTGACCATTCCAGATCCACCACCCAGGAATAAATCTTCCAAGGATAAGGCCACAAAAAAAGATGCCCTTCAAGATTATGTCACCTTTATCTATCAAACAAAAATAGCAAGTTTATTTCGTAGTGTGGTAGTGACATGGTGCAAGAACCCAATAGAGCACTCCCTTTCCATGAGTGTGGAAAACCCTTGTGAACAAAACAAGTACACCTGCAAGATTGATTTAGAATCAGGACAATCTTGGGGGAAAAAGGGTCTCAAATCCTTTGAAATAGAAGGTGCAAGATTAGATATTTTTTGGGATTTTCGACACGCGAAATTCTCCACAAATCCACAGCCTTGCTCAGGCTATTATGTTGCCTTGGTTTACAAGAAAGAGGTACTTTTATTACTGGGAGATCTTGATAAGGATGCTTATATAAGAACCAAATCAAAACCATCCACAGAAGAGGCTACCTTGTTGTGCAAGAAAGAGAGTGTTCATGGGAAGAAGCTATTTTGTACTAGGGCCATGTTGGAAGAAGGTAAACCAGAACATGATGTTGTCATTGAGACTTCCCTTTCTGGGCCTGATGACCCAGAAATGTGGATTAGCATAGATGGGATGTTGGCTAGTAGAATAATGAACTTGAATTGGAAATTCAGAGGGAATGAAATAGTGATGGTAAATAATTTACCTGTGCAAATCTTTTGGGATGTACATGATTGGTTGTTCAATAATGACAACCTTGGTTCAGGCCCTGCCTTGTTTATTTTCAAGCCAGGCTTTTTGGAATCTACTAGTGATCCTAATAGCAAAGAATGCACGAAAAGAAGTGAGGATAGTGACAGACACGACTTAATAGAGGAGAATCCATCCACCAAAAGTTTTTTCCATTTTCTGACCATTTGGAAGTTTCAAATTGCTTGCTTGAAGAGTAGAGGCTTTAGTTATTCGGTTCCTGTTAGGTACATTCCCAACACATCCTCCAGGGTGAAAATACCTGAAACTTCTCTGTCAGTGAAAAGCCTGCAAAAATGTGGCTTTGCTGATGTCAGTGTGCCCAAGATAAATGGTAGGAAAGATGGGCATGCAACAATTGCACATTGTGAAACTTCTCAAAATCCAGATGAAATTCACTCTGACATCTTACTCTTTGATGACAGTGAAGAAGGTTCTGAACAAATGGAAGAGATTGGGGAGTTGACAGTCCATCATGCNGGAGACTCTTCTGAACAGGATTTAATACGAGTTGACAAATTTACCAACAAATTTACCAATGATGTTGAACAATCAGCTATCAAATTTCTTGCATCTAGGGCACTCACAGCAGTTGAGTTGAGAAAGAAATTGCTTGGAAAGAGATTCTCTCCTAATGCAGTGGAGGCAGTGATAAACAAGTTCCAGAGAGAGTATGTAGTTAACAATATGAAAACTGTTGAGCTGTTATTTATCAGCCATTTTGAAATGCATCCTTACTTGAAGCTTTACTTGCTTTCAGACGAAGGGATGATCAATGATAGGTTGTATGCTGAATCATTTTCTCAATCTAGATGGTCTTCGTCAAGTTGGGGGCCAAGGAGGNTCAAACAGGCACTGTTCAAGAAGGGAGTTAGTCAAGCTGATGCTGAAAAGGCAATTGAAGTGGTTTTCAAGGACAATGATTGTGCTGAAGATCAGAAATCAGTTATTGGCTTGTCAAAGCATTCCATGGATCATCTTTATGCTCAGGCCTCAAAGCAGTGGTTCAGAGGTCAGAATGTATCCAAGGAGACAAGGAAATCGAGGATTGTTCGATGGCTTCAATATCGTGGTTTTGACTGGAATGTCATTAGCTACATACTAAAGAGATTAGACAGACAGGAGCAGAATCCTCCATAG

Protein Sequence

>Glyur001571s00028313.1
MPQESIPNSFFTSPSKRGLNLKGSVFSNSEAYSFTGTEESINDHELAQRKAEEAASRRNEAAEWLREMDDGACASLSKEPSEEEFCLALRNGLILCNXLNKVNPGAVLKVVENPVIAIQSAEGAAHSAIQYFENMKNFLDAVKAMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGTPSSTVGSESADESRSPQYDQLLEFLNLSQEVSIEETRTVNALASLFDQFGLKLLQAYLRETDGVEDLPLNAMVIDTXLSKIVRDFSALLVSQGTQLGLFLKKILKGGVGCLSKREFVEAITLYLNQRSSLALNDFSKFCTCGGKLDSTQHNVNYSAKHAEIIDAQQKQLEGMKYFFEELKLEVKKIQYAWDQELSRLENHIKSLEVASSSYHKVLEENRSLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSSVDYIGENGNIMILNPLKQGKDARRVFSFNKVFATNATQEQIYGDTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFQISKERADAIKYERNRAVGATALNERSSRSHSVLTVHVRGRDLISNSVLKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKLALERKETELEQWKSGNARNATESQKPRAVSPFRLPKNGTTSGSMKPENCQRSMDDRSSEAKSCSSGKQRRSRFPSKFMDKDSMPKMSLLAEEKSVSSGKGRSPSPPIRRSISTDRGSVIKSKVKIDISDNQPILKHPXPARVPVNKSLITVTMSPSTDNNSRVHVHSQEPVKLDNISEPHFNLPNVNSRKAHQEHEEEQFKQPFGVVRQGGVSVRKSKNDNKAKVKHHQQLPFRIQKADLIPTLIXDMEIANVEAPQKSDYFEPENDIGLMEHAVHESVTLTIPDPPPRNKSSKDKATKKDALQDYVTFIYQTKIASLFRSVVVTWCKNPIEHSLSMSVENPCEQNKYTCKIDLESGQSWGKKGLKSFEIEGARLDIFWDFRHAKFSTNPQPCSGYYVALVYKKEVLLLLGDLDKDAYIRTKSKPSTEEATLLCKKESVHGKKLFCTRAMLEEGKPEHDVVIETSLSGPDDPEMWISIDGMLASRIMNLNWKFRGNEIVMVNNLPVQIFWDVHDWLFNNDNLGSGPALFIFKPGFLESTSDPNSKECTKRSEDSDRHDLIEENPSTKSFFHFLTIWKFQIACLKSRGFSYSVPVRYIPNTSSRVKIPETSLSVKSLQKCGFADVSVPKINGRKDGHATIAHCETSQNPDEIHSDILLFDDSEEGSEQMEEIGELTVHHAGDSSEQDLIRVDKFTNKFTNDVEQSAIKFLASRALTAVELRKKLLGKRFSPNAVEAVINKFQREYVVNNMKTVELLFISHFEMHPYLKLYLLSDEGMINDRLYAESFSQSRWSSSSWGPRRXKQALFKKGVSQADAEKAIEVVFKDNDCAEDQKSVIGLSKHSMDHLYAQASKQWFRGQNVSKETRKSRIVRWLQYRGFDWNVISYILKRLDRQEQNPP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01571	1418	16042	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006282 regulation of DNA repair

GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001571s00028313.1	PF00307.26	CH	84	176	4.20E-06
Glyur001571s00028313.1	PF00225.18	Kinesin	438	556	2.50E-26
Glyur001571s00028313.1	PF00225.18	Kinesin	561	699	3.50E-53
Glyur001571s00028313.1	PF05910.7	DUF868	1027	1302	1.50E-79
Glyur001571s00028313.1	PF02631.11	RecX	1496	1614	2.40E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.404
SRR1783600	control	1.444
SRR1783602	moderate drought stress	1.105
SRR1811619	moderate drought stress	1.015

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.734
DRR006520	Root Summer glycyrrhizin high producing strain	2.692
DRR006521	Root Winter glycyrrhizin high producing strain	0.641
DRR006522	Root Winter glycyrrhizin high producing strain	0.559
DRR006523	Root Summer glycyrrhizin low producing strain	1.744
DRR006524	Root Summer glycyrrhizin low producing strain	1.499
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.363
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.210

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.673
SRR2868004	Drought Stress (root)	2.573
SRR2967015	Control (root)	3.434

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.127
SRR9715740	Leaf	2.232
SRR9715741	Leaf	0.853
SRR9715739	Root	0.328
SRR9715742	Root	1.043
SRR9715743	Root	1.114

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.086
SRR8749028	MeJA induced 9h	0.808
SRR8749029	MeJA induced 9h	0.746
SRR8749030	Uninduced	0.232
SRR8749031	Uninduced	0.245
SRR8749032	Uninduced	0.180

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.183
SRR8400027	Control - Root	5.996