Gene detail information of Glyur001567s00029707 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49700.1 | 1.00E-06 | Plant protein 1589 of unknown function |
| NR | XP_003589972.1 | 2.09E-29 | hypothetical protein MTR_1g042410 [Medicago truncatula] |
| trEMBL | tr|G7I3T0|G7I3T0_MEDTR | 8.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:AES60223.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01567 | 23407 | 23700 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.033 |
| SRR1783600 | control | 1.189 |
| SRR1783602 | moderate drought stress | 3.239 |
| SRR1811619 | moderate drought stress | 2.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.764 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.166 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.415 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.168 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.861 |
| SRR2868004 | Drought Stress (root) | 1.456 |
| SRR2967015 | Control (root) | 1.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.066 |
| SRR9715742 | Root | 0.090 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.946 |
| SRR8749028 | MeJA induced 9h | 0.269 |
| SRR8749029 | MeJA induced 9h | 0.407 |
| SRR8749030 | Uninduced | 0.729 |
| SRR8749031 | Uninduced | 0.205 |
| SRR8749032 | Uninduced | 3.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.045 |
| SRR8400027 | Control - Root | 0.070 |