Gene detail information of Glyur001567s00029706 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003589969.1 | 9.91E-14 | hypothetical protein MTR_1g042380 [Medicago truncatula] |
| trEMBL | tr|V7ALL1|V7ALL1_PHAVU | 3.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:ESW05036.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01567 | 22155 | 23705 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.150 |
| SRR1783600 | control | 1.896 |
| SRR1783602 | moderate drought stress | 1.306 |
| SRR1811619 | moderate drought stress | 1.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.901 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.399 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.837 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.631 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.423 |
| SRR2868004 | Drought Stress (root) | 1.056 |
| SRR2967015 | Control (root) | 1.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.518 |
| SRR9715740 | Leaf | 0.201 |
| SRR9715741 | Leaf | 0.104 |
| SRR9715739 | Root | 2.841 |
| SRR9715742 | Root | 0.856 |
| SRR9715743 | Root | 1.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.698 |
| SRR8749028 | MeJA induced 9h | 0.082 |
| SRR8749029 | MeJA induced 9h | 1.261 |
| SRR8749030 | Uninduced | 0.101 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 2.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.071 |
| SRR8400027 | Control - Root | 0.223 |