Gene detail information of Glyur001567s00029703 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44020.1 | 2.00E-06 | thylakoid lumenal P17.1 protein |
| NR | XP_008453508.1 | 6.52E-11 | PREDICTED: uncharacterized protein LOC103494197 isoform X2 [Cucumis melo] |
| trEMBL | tr|A0A061GTU9|A0A061GTU9_THECC | 4.00E-07 | Thylakoid lumenal P17.1 protein {ECO:0000313|EMBL:EOY33250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01567 | 4718 | 8162 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.693 |
| SRR1783600 | control | 0.724 |
| SRR1783602 | moderate drought stress | 1.229 |
| SRR1811619 | moderate drought stress | 1.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.780 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.188 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.955 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.419 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.568 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.761 |
| SRR2868004 | Drought Stress (root) | 0.275 |
| SRR2967015 | Control (root) | 0.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.056 |
| SRR9715740 | Leaf | 6.295 |
| SRR9715741 | Leaf | 4.915 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.013 |
| SRR9715743 | Root | 0.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.337 |
| SRR8749028 | MeJA induced 9h | 0.143 |
| SRR8749029 | MeJA induced 9h | 0.276 |
| SRR8749030 | Uninduced | 0.141 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.554 |
| SRR8400027 | Control - Root | 0.602 |