Gene detail information of Glyur001557s00038543 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40500.1 | 3.00E-28 | |
| NR | XP_004514008.1 | 2.12E-69 | PREDICTED: uncharacterized protein LOC101495093 isoform X3 [Cicer arietinum] |
| trEMBL | tr|K7MFM3|K7MFM3_SOYBN | 3.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G07641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01557 | 6800 | 15742 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.316 |
| SRR1783600 | control | 3.203 |
| SRR1783602 | moderate drought stress | 8.994 |
| SRR1811619 | moderate drought stress | 9.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.987 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.047 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.271 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.869 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.511 |
| SRR2868004 | Drought Stress (root) | 1.966 |
| SRR2967015 | Control (root) | 2.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.536 |
| SRR9715740 | Leaf | 19.610 |
| SRR9715741 | Leaf | 19.139 |
| SRR9715739 | Root | 0.845 |
| SRR9715742 | Root | 1.319 |
| SRR9715743 | Root | 1.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.593 |
| SRR8749028 | MeJA induced 9h | 8.219 |
| SRR8749029 | MeJA induced 9h | 8.797 |
| SRR8749030 | Uninduced | 5.885 |
| SRR8749031 | Uninduced | 4.982 |
| SRR8749032 | Uninduced | 6.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.226 |
| SRR8400027 | Control - Root | 2.831 |