Gene detail information of Glyur001545s00044580 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AAN60239.1 | 3.99E-06 | unknown [Arabidopsis thaliana] |
| Swissprot | tr|Q2HIW2|MAPR4_ARATH | 3.00E-08 | Membrane-associated progesterone-binding protein 4 {ECO:0000303|Ref.6} |
| trEMBL | tr|Q8H7H0|Q8H7H0_ARATH | 1.00E-06 | Putative uncharacterized protein {ECO:0000313|EMBL:AAN60239.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01545 | 6586 | 8477 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.165 |
| SRR1783600 | control | 1.290 |
| SRR1783602 | moderate drought stress | 1.946 |
| SRR1811619 | moderate drought stress | 1.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.301 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.952 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.577 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.612 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.535 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.154 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.580 |
| SRR2868004 | Drought Stress (root) | 0.595 |
| SRR2967015 | Control (root) | 0.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.257 |
| SRR9715740 | Leaf | 1.801 |
| SRR9715741 | Leaf | 0.941 |
| SRR9715739 | Root | 0.308 |
| SRR9715742 | Root | 0.949 |
| SRR9715743 | Root | 1.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.726 |
| SRR8749028 | MeJA induced 9h | 1.527 |
| SRR8749029 | MeJA induced 9h | 0.595 |
| SRR8749030 | Uninduced | 1.150 |
| SRR8749031 | Uninduced | 0.582 |
| SRR8749032 | Uninduced | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.993 |
| SRR8400027 | Control - Root | 1.304 |