Gene detail

Gene detail information of Glyur001542s00036587

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16150.1	3.00E-148	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
NR	XP_004499019.1	0	PREDICTED: probable isoaspartyl peptidase/L-asparaginase 2-like [Cicer arietinum]
COG	YP_629420.1	2.00E-71	asparaginase [Myxococcus xanthus DK 1622]
Swissprot	tr\|Q8GXG1\|ASPGB_ARATH	0	Isoaspartyl peptidase/L-asparaginase 2 subunit beta (Precursor)
trEMBL	tr\|I1M8R0\|I1M8R0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G09510.1}

Sequence

Transcript Sequence

>Glyur001542s00036587.1
GGCCCAATTTAGTTTTCTAATTTACGTGTCTCTAGGTTACTAATGACAGTCAATTGACAACCAAATACNAATACTACGTTACATAATAACAGACACTTGTAATCTCTCCCCCTCTCACCCGAAAGAACNGGCGGCCAGCACACGCCCAAACCAAATATTAACTCTTCTTCCCACGAGACCCCAAATTTAATTGCAACACATAAGCCTTTGAAATCCGAAATTGCCTATAAAACCAACCCTTCGATCACAGAAGTTGTTGCAATCTCCACATACACAAAAACAGAAAACAGAGGGGCAGAGAGAGAGAGAGTCAGAGAGAGAGAAATATGGGGGGTTGGGCTATCGCGGTGCATGGTGGCGCTGGTGTTGACCCAAATCTCCCTCTCCAGCGCCAGGAAGAAGCAAAACAACTCCTTACGCGCTGTCTCAATCTTGGCATCTCTGCTCTTGGTTCCAATGTTTCCGCCATCGATGTCGTCGAACTTGTGGTGAGGGAATTGGAAACGGATCCATTGTTCAACTCGGGTCGTGGATCTGCCCTGACCGAAAAAGGGACGGTGGAGATGGAGGCTAGCATAATGGATGGNCCAAAGAGACGATGCGGTGCCGTTTCGGGGGTCACCACAGTGAAGAACCCCATCTCACTGGCTCGGTTAGTCATGGACAAATCCCCTCATTCCTACCTCGCCTTCGACGGCGCCGAAGAGTTCGCCAGGCAACAGGTTCGGATCAATTCCCACGGTGTGGAGGTTGTGGACAACGAATACTTTATCACCCCTGACAATGTTGGTATGCTCAAGCTGGCAAAGGAAGCAAATGCAATCCTGTTTGATTATCGGATCCCAACATCTGGGTACGAGACATGCGGTTCAGGTGTAGAGAGTCCACTACAAATGAACGGGCTTCCGATAAGCGTGTACGCGCCAGAGACGGTAGGGTGCGTGGTGGTGGACCGTGAAGGTAGGTGCGCAGCTGCCACGTCAACAGGTGGATTAATGAACAAAATGGTTGGTCGAATCGGTGACTCACCCCTAATAGGAGCTGGGACCTACGCGTGCAACATCTGTGGTGTGTCTTGCACGGGAGAAGGAGAGGCAATCATACGTGGCACACTGGCGCGTGAGGTTGCGGCTGTCATGGAATACAAGGGCCTTGGTCTCCAACAAGCAGTGGATTTTGTCATTAAGCACCGACTCGATGATGGGAAAGCGGGTCTCATTGCTGTTTCTAACACCGGTGAAGTTGCTTATGGTTTCAACTGCAATGGCTGTTCCGTGGTTGTGCCACCGAGGATGGGTTCATGGAGGTTGGAATCTGGGAGTAATTAATTAGTGGGTCTTTTTTTCTTCTCTTTGTTTTCTTCAATTTGTTTTCAGTTAATTCGGGGTGGGTTTAGTTGGTCACTAAGTTTAATTAGTTGTTTTCACCGCAATTTGTTTTAGTCTGGTTTTAAGTTGGAAATAGGGTCTTGCTGGTGCTGTAATTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01542	46365	49782	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001542s00036587.1	PF01112.13	Asparaginase_2	3	315	5.60E-94

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	29.976
SRR1783600	control	29.661
SRR1783602	moderate drought stress	17.299
SRR1811619	moderate drought stress	16.898

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	28.794
DRR006520	Root Summer glycyrrhizin high producing strain	27.836
DRR006521	Root Winter glycyrrhizin high producing strain	65.737
DRR006522	Root Winter glycyrrhizin high producing strain	62.636
DRR006523	Root Summer glycyrrhizin low producing strain	29.117
DRR006524	Root Summer glycyrrhizin low producing strain	29.361
DRR006525	Leaf Summer glycyrrhizin high producing strain	203.685
DRR006526	Leaf Summer glycyrrhizin high producing strain	200.533

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	283.597
SRR2868004	Drought Stress (root)	207.423
SRR2967015	Control (root)	244.161

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	330.805
SRR9715740	Leaf	155.097
SRR9715741	Leaf	243.073
SRR9715739	Root	136.812
SRR9715742	Root	199.311
SRR9715743	Root	183.203

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.197
SRR8749028	MeJA induced 9h	21.459
SRR8749029	MeJA induced 9h	55.116
SRR8749030	Uninduced	47.550
SRR8749031	Uninduced	18.664
SRR8749032	Uninduced	66.259

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	402.512
SRR8400027	Control - Root	417.647