Gene detail information of Glyur001537s00028912 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16060.1 | 8.00E-107 | |
| NR | XP_004487818.1 | 2.17E-170 | PREDICTED: uncharacterized protein LOC101504309 [Cicer arietinum] |
| trEMBL | tr|V7B245|V7B245_PHAVU | 6.00E-165 | Uncharacterized protein {ECO:0000313|EMBL:ESW10943.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01537 | 54333 | 57082 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.478 |
| SRR1783600 | control | 33.494 |
| SRR1783602 | moderate drought stress | 30.762 |
| SRR1811619 | moderate drought stress | 30.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.266 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.989 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.414 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.580 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.872 |
| SRR2868004 | Drought Stress (root) | 19.374 |
| SRR2967015 | Control (root) | 14.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.146 |
| SRR9715740 | Leaf | 19.433 |
| SRR9715741 | Leaf | 19.542 |
| SRR9715739 | Root | 18.311 |
| SRR9715742 | Root | 16.711 |
| SRR9715743 | Root | 15.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.976 |
| SRR8749028 | MeJA induced 9h | 11.513 |
| SRR8749029 | MeJA induced 9h | 8.215 |
| SRR8749030 | Uninduced | 8.952 |
| SRR8749031 | Uninduced | 4.590 |
| SRR8749032 | Uninduced | 3.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.284 |
| SRR8400027 | Control - Root | 18.819 |