Gene detail information of Glyur001537s00028906 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001238264.1 | 6.87E-74 | uncharacterized protein LOC100306656 [Glycine max] |
| Swissprot | tr|P17642|PRS2_SOLTU | 1.00E-47 | Pathogenesis-related protein STH-2 |
| trEMBL | tr|C6T0C1|C6T0C1_SOYBN | 3.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01537 | 21778 | 22579 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001537s00028906.1 | PF00407.14 | Bet_v_1 | 38 | 128 | 4.90E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.500 |
| SRR1783600 | control | 0.565 |
| SRR1783602 | moderate drought stress | 3.057 |
| SRR1811619 | moderate drought stress | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.274 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.755 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.185 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.099 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.625 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.223 |
| SRR2868004 | Drought Stress (root) | 179.437 |
| SRR2967015 | Control (root) | 57.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.382 |
| SRR9715740 | Leaf | 1.721 |
| SRR9715741 | Leaf | 22.237 |
| SRR9715739 | Root | 0.699 |
| SRR9715742 | Root | 0.811 |
| SRR9715743 | Root | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.612 |
| SRR8749028 | MeJA induced 9h | 5.561 |
| SRR8749029 | MeJA induced 9h | 2.337 |
| SRR8749030 | Uninduced | 560.268 |
| SRR8749031 | Uninduced | 419.345 |
| SRR8749032 | Uninduced | 152.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.161 |
| SRR8400027 | Control - Root | 17.020 |