Gene detail

Gene detail information of Glyur001537s00028901

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G24020.2	3.00E-04	MLP-like protein 423
NR	CAB61739.1	2.81E-84	putative ABA-responsive protein [Cicer arietinum]
Swissprot	tr\|P52779\|L18B_LUPLU	5.00E-81	Protein LlR18B
trEMBL	tr\|Q9SMK8\|Q9SMK8_CICAR	1.00E-84	Putative ABA-responsive protein {ECO:0000313\|EMBL:CAB61739.1}

Sequence

Transcript Sequence

>Glyur001537s00028901.1
ATTAAATTAAAGATTGTACAAACAGGACTGACACAATAAATAAACATCATGATCACCAACAACCTGAGTGTGAACTTCTTCGAACAAATTCGGCTAAATAATAAAGTAGCATATATATTTACGAGTACAATTAAAGGTCTAAGGTCTTGGCCAGGGTCTATAAATAACATCCCTCCCCATGATATTAATCGCACCACATACTACCTCTCCCCAATTTTCTTCTCATATAGTACTTGCATAATTAGTTCTCTTCGATCATATATATATAATATTATCATGGGTGTTTTTGCTTACGATGATGAACACCACTCTACCGTGCCTCCGGTTAAACTCTACAAAGCCCTGGCTATAGATTCCGACAATATCATCCCAAAGGTGATTGAGCCCATCCAGAGTGTTGAAATCGTCGAAGGAAATGGTGGCCCCGGAACCGTCAAGAAGCTAACCGCTGTTGAAGGTGGAAAAACCAGCTATATACTGCACAAAGTGGAAGCAATCGATGAGGCAAACTTGGCATATGACTACAGCATAGTGGGAGGGACAGGTTTAGATGAGAGCTTGGAGAAAGTGTCATTCGAGACGAAGGTGGTGCCTGGCCCCAATGGTGGGTCCATTTCAAAGGTCTCTGTGAAGTACCACACCAAGGGCGATGCGGTGCTGTCAGATGCAGTGCGTGAGGAAACAAAGGCCAAGGGTGATGGACTCTTCAAGGCCATTGAGGGCTACGTTTTGGCAAATCCCAATTACTAGATGAAGAGAAAAAATATATATACACTTGCTTTTGGTTGATTAATATTTAGCTTTTGGTTGGTTAATTAATCAAAGTCTATATCTCTGGTTGTTTGATTTGCATCACGAATATCCCTGGCTCGTACATGTGGCTTTCTGTTGTGGTCTTGTGAAGTACTATAGTGTCGGTTTGAGTGTGTGTTGTGTGGGTGAATTTTGTTGGTTGGGTACTAATACTATTCTGCATACAAAAATCTATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01537	9678	11532	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006952 defense response

GO:0009607 response to biotic stimulus

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001537s00028901.1	PF00407.14	Bet_v_1	77	230	1.40E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	385.553
SRR1783600	control	365.273
SRR1783602	moderate drought stress	331.495
SRR1811619	moderate drought stress	345.495

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	224.913
DRR006520	Root Summer glycyrrhizin high producing strain	218.913
DRR006521	Root Winter glycyrrhizin high producing strain	1404.677
DRR006522	Root Winter glycyrrhizin high producing strain	1347.126
DRR006523	Root Summer glycyrrhizin low producing strain	148.193
DRR006524	Root Summer glycyrrhizin low producing strain	147.177
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.630
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.883

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	460.069
SRR2868004	Drought Stress (root)	651.239
SRR2967015	Control (root)	999.326

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	183.282
SRR9715740	Leaf	196.694
SRR9715741	Leaf	332.087
SRR9715739	Root	946.702
SRR9715742	Root	868.034
SRR9715743	Root	840.456

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	707.887
SRR8749028	MeJA induced 9h	1564.484
SRR8749029	MeJA induced 9h	730.408
SRR8749030	Uninduced	632.439
SRR8749031	Uninduced	355.698
SRR8749032	Uninduced	315.230

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	293.168
SRR8400027	Control - Root	241.035