Gene detail information of Glyur001533s00032759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN15600.1 | 5.72E-70 | TMV resistance protein N [Glycine soja] |
| trEMBL | tr|C6ZS22|C6ZS22_SOYBN | 2.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G16780.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01533 | 59146 | 59556 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.160 |
| SRR1783600 | control | 0.230 |
| SRR1783602 | moderate drought stress | 0.401 |
| SRR1811619 | moderate drought stress | 0.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.346 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.026 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.806 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.757 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.481 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.449 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.239 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.753 |
| SRR2868004 | Drought Stress (root) | 12.058 |
| SRR2967015 | Control (root) | 9.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 77.712 |
| SRR9715740 | Leaf | 11.927 |
| SRR9715741 | Leaf | 90.189 |
| SRR9715739 | Root | 0.237 |
| SRR9715742 | Root | 1.714 |
| SRR9715743 | Root | 3.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 326.026 |
| SRR8749028 | MeJA induced 9h | 546.979 |
| SRR8749029 | MeJA induced 9h | 611.620 |
| SRR8749030 | Uninduced | 436.314 |
| SRR8749031 | Uninduced | 942.467 |
| SRR8749032 | Uninduced | 517.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.005 |
| SRR8400027 | Control - Root | 4.673 |