Gene detail information of Glyur001533s00032752 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27150.1 | 7.00E-149 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_003613502.1 | 0 | Tetratricopeptide repeat protein [Medicago truncatula] |
| COG | YP_007122480.1 | 9.00E-57 | hypothetical protein Mic7113_3342 [Microcoleus sp. PCC 7113] |
| trEMBL | tr|G7K8A8|G7K8A8_MEDTR | 0 | TPR-like protein {ECO:0000313|EMBL:AES96460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01533 | 17356 | 23465 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.637 |
| SRR1783600 | control | 2.618 |
| SRR1783602 | moderate drought stress | 4.948 |
| SRR1811619 | moderate drought stress | 4.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.204 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.304 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.985 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.156 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.977 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.968 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.963 |
| SRR2868004 | Drought Stress (root) | 9.088 |
| SRR2967015 | Control (root) | 8.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.023 |
| SRR9715740 | Leaf | 4.824 |
| SRR9715741 | Leaf | 5.915 |
| SRR9715739 | Root | 0.595 |
| SRR9715742 | Root | 2.058 |
| SRR9715743 | Root | 2.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.855 |
| SRR8749028 | MeJA induced 9h | 6.677 |
| SRR8749029 | MeJA induced 9h | 2.457 |
| SRR8749030 | Uninduced | 5.043 |
| SRR8749031 | Uninduced | 5.535 |
| SRR8749032 | Uninduced | 2.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.173 |
| SRR8400027 | Control - Root | 6.761 |