Gene detail information of Glyur001529s00032039 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28330.1 | 2.00E-04 | |
| NR | XP_003521678.1 | 7.80E-54 | PREDICTED: unknown protein 1-like [Glycine max] |
| trEMBL | tr|I1JJY5|I1JJY5_SOYBN | 3.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G00320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01529 | 59852 | 61503 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.401 |
| SRR1783600 | control | 4.441 |
| SRR1783602 | moderate drought stress | 6.342 |
| SRR1811619 | moderate drought stress | 6.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.302 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.934 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.435 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.524 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.121 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.642 |
| SRR2868004 | Drought Stress (root) | 8.082 |
| SRR2967015 | Control (root) | 8.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.009 |
| SRR9715740 | Leaf | 3.516 |
| SRR9715741 | Leaf | 2.691 |
| SRR9715739 | Root | 4.293 |
| SRR9715742 | Root | 3.986 |
| SRR9715743 | Root | 5.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.157 |
| SRR8749028 | MeJA induced 9h | 10.582 |
| SRR8749029 | MeJA induced 9h | 12.402 |
| SRR8749030 | Uninduced | 3.578 |
| SRR8749031 | Uninduced | 3.450 |
| SRR8749032 | Uninduced | 4.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.663 |
| SRR8400027 | Control - Root | 6.021 |