Gene detail information of Glyur001528s00028668 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58350.2 | 0 | Putative serine esterase family protein |
| NR | XP_004485525.1 | 0 | PREDICTED: protein FAM135B-like [Cicer arietinum] |
| trEMBL | tr|K7L7G2|K7L7G2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G19571.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01528 | 50303 | 56920 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001528s00028668.1 | PF12394.3 | DUF3657 | 149 | 214 | 3.60E-13 |
| Glyur001528s00028668.1 | PF05057.9 | DUF676 | 518 | 699 | 1.00E-47 |
| Glyur001528s00028668.2 | PF12394.3 | DUF3657 | 149 | 214 | 3.50E-13 |
| Glyur001528s00028668.2 | PF05057.9 | DUF676 | 497 | 678 | 9.70E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.164 |
| SRR1783600 | control | 13.111 |
| SRR1783602 | moderate drought stress | 8.746 |
| SRR1811619 | moderate drought stress | 8.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.303 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.955 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.635 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.911 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.025 |
| SRR2868004 | Drought Stress (root) | 11.267 |
| SRR2967015 | Control (root) | 12.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.906 |
| SRR9715740 | Leaf | 0.754 |
| SRR9715741 | Leaf | 1.728 |
| SRR9715739 | Root | 0.943 |
| SRR9715742 | Root | 4.813 |
| SRR9715743 | Root | 4.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.085 |
| SRR8749028 | MeJA induced 9h | 3.756 |
| SRR8749029 | MeJA induced 9h | 2.976 |
| SRR8749030 | Uninduced | 2.569 |
| SRR8749031 | Uninduced | 1.488 |
| SRR8749032 | Uninduced | 1.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.478 |
| SRR8400027 | Control - Root | 17.375 |