Gene detail information of Glyur001528s00028664 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26040.1 | 5.00E-65 | HXXXD-type acyl-transferase family protein |
| NR | XP_003547065.2 | 0 | PREDICTED: vinorine synthase-like [Glycine max] |
| Swissprot | tr|Q70PR7|VINSY_RAUSE | 3.00E-66 | Vinorine synthase |
| trEMBL | tr|I1MDS4|I1MDS4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01528 | 32997 | 36185 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001528s00028664.1 | PF02458.10 | Transferase | 6 | 460 | 2.20E-85 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.680 |
| SRR1783600 | control | 16.013 |
| SRR1783602 | moderate drought stress | 7.230 |
| SRR1811619 | moderate drought stress | 7.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.951 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.229 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.224 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.821 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.712 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.040 |
| SRR2868004 | Drought Stress (root) | 4.682 |
| SRR2967015 | Control (root) | 5.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.064 |
| SRR9715740 | Leaf | 0.088 |
| SRR9715741 | Leaf | 0.685 |
| SRR9715739 | Root | 20.466 |
| SRR9715742 | Root | 10.354 |
| SRR9715743 | Root | 11.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.110 |
| SRR8749028 | MeJA induced 9h | 1.783 |
| SRR8749029 | MeJA induced 9h | 1.394 |
| SRR8749030 | Uninduced | 0.561 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.052 |
| SRR8400027 | Control - Root | 10.235 |