Gene detail information of Glyur001526s00032538 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13480.1 | 9.00E-76 | Protein of unknown function (DUF1262) |
| NR | AFK44365.1 | 0 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SVS3|I3SVS3_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK44365.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01526 | 11221 | 13130 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001526s00032538.1 | PF06880.6 | DUF1262 | 23 | 123 | 1.30E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.676 |
| SRR1783600 | control | 0.634 |
| SRR1783602 | moderate drought stress | 0.485 |
| SRR1811619 | moderate drought stress | 0.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.533 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.988 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.081 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.936 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.552 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.061 |
| SRR2868004 | Drought Stress (root) | 86.059 |
| SRR2967015 | Control (root) | 51.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 365.728 |
| SRR9715740 | Leaf | 191.395 |
| SRR9715741 | Leaf | 450.776 |
| SRR9715739 | Root | 10.953 |
| SRR9715742 | Root | 91.439 |
| SRR9715743 | Root | 76.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.663 |
| SRR8749028 | MeJA induced 9h | 15.142 |
| SRR8749029 | MeJA induced 9h | 28.136 |
| SRR8749030 | Uninduced | 444.705 |
| SRR8749031 | Uninduced | 142.835 |
| SRR8749032 | Uninduced | 134.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.996 |
| SRR8400027 | Control - Root | 48.254 |