Gene detail information of Glyur001524s00034553 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH38435.1 | 6.02E-22 | Rpp4C3 [Medicago truncatula] |
| trEMBL | tr|A0A072VJY3|A0A072VJY3_MEDTR | 2.00E-22 | Rpp4C3 {ECO:0000313|EMBL:KEH38435.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01524 | 22331 | 24915 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.691 |
| SRR1783600 | control | 1.905 |
| SRR1783602 | moderate drought stress | 2.565 |
| SRR1811619 | moderate drought stress | 2.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.543 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.323 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.003 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.657 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.323 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.239 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.519 |
| SRR2868004 | Drought Stress (root) | 1.996 |
| SRR2967015 | Control (root) | 1.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.497 |
| SRR9715740 | Leaf | 0.043 |
| SRR9715741 | Leaf | 0.884 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.329 |
| SRR9715743 | Root | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.744 |
| SRR8749028 | MeJA induced 9h | 1.557 |
| SRR8749029 | MeJA induced 9h | 0.613 |
| SRR8749030 | Uninduced | 0.801 |
| SRR8749031 | Uninduced | 0.438 |
| SRR8749032 | Uninduced | 0.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.024 |
| SRR8400027 | Control - Root | 3.743 |