Gene detail information of Glyur001522s00034826 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23240.1 | 2.00E-108 | DNAJ heat shock N-terminal domain-containing protein |
| NR | XP_003534680.2 | 0 | PREDICTED: uncharacterized protein LOC100783616 [Glycine max] |
| COG | YP_007101507.1 | 1.00E-17 | ferredoxin-like protein [Pseudanabaena sp. PCC 7367] |
| Swissprot | tr|Q9SDN0|DNJ20_ARATH | 1.00E-07 | Chaperone protein dnaJ 20, chloroplastic (Precursor) |
| trEMBL | tr|I1L792|I1L792_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G42020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01522 | 55387 | 59986 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001522s00034826.1 | PF00226.26 | DnaJ | 101 | 162 | 4.00E-14 |
| Glyur001522s00034826.1 | PF13459.1 | Fer4_15 | 193 | 249 | 1.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.271 |
| SRR1783600 | control | 0.283 |
| SRR1783602 | moderate drought stress | 0.147 |
| SRR1811619 | moderate drought stress | 0.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.956 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.066 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.600 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.494 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.459 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.404 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 177.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 176.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.678 |
| SRR2868004 | Drought Stress (root) | 0.739 |
| SRR2967015 | Control (root) | 0.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.984 |
| SRR9715740 | Leaf | 8.586 |
| SRR9715741 | Leaf | 1.617 |
| SRR9715739 | Root | 0.110 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.879 |
| SRR8749028 | MeJA induced 9h | 0.576 |
| SRR8749029 | MeJA induced 9h | 0.783 |
| SRR8749030 | Uninduced | 0.849 |
| SRR8749031 | Uninduced | 0.493 |
| SRR8749032 | Uninduced | 0.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.180 |
| SRR8400027 | Control - Root | 0.230 |