Gene detail information of Glyur001519s00034469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61670.2 | 3.00E-127 | |
| NR | XP_004506360.1 | 0 | PREDICTED: uncharacterized protein LOC101505582 [Cicer arietinum] |
| trEMBL | tr|I1LNQ9|I1LNQ9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00600.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01519 | 58284 | 63651 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.919 |
| SRR1783600 | control | 29.144 |
| SRR1783602 | moderate drought stress | 31.425 |
| SRR1811619 | moderate drought stress | 31.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.641 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.548 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.288 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.929 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.630 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.897 |
| SRR2868004 | Drought Stress (root) | 76.929 |
| SRR2967015 | Control (root) | 71.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 105.837 |
| SRR9715740 | Leaf | 133.831 |
| SRR9715741 | Leaf | 142.988 |
| SRR9715739 | Root | 17.803 |
| SRR9715742 | Root | 30.941 |
| SRR9715743 | Root | 25.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.378 |
| SRR8749028 | MeJA induced 9h | 26.857 |
| SRR8749029 | MeJA induced 9h | 29.468 |
| SRR8749030 | Uninduced | 25.397 |
| SRR8749031 | Uninduced | 14.544 |
| SRR8749032 | Uninduced | 29.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.152 |
| SRR8400027 | Control - Root | 48.002 |