Gene detail information of Glyur001518s00034893 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39890.1 | 7.00E-30 | Protein of unknown function (DUF1637) |
| NR | XP_004489672.1 | 5.73E-78 | PREDICTED: 2-aminoethanethiol dioxygenase-like [Cicer arietinum] |
| trEMBL | tr|C6TGT8|C6TGT8_SOYBN | 7.00E-78 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G24120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01518 | 3426 | 8116 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10712 | ADO | EC:1.13.11.19 | Taurine and hypotaurine metabolism | map00430 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001518s00034893.1 | PF07847.7 | DUF1637 | 80 | 167 | 2.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.414 |
| SRR1783600 | control | 0.326 |
| SRR1783602 | moderate drought stress | 0.159 |
| SRR1811619 | moderate drought stress | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.437 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.047 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 294.554 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 286.028 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.315 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.715 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.179 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.604 |
| SRR2868004 | Drought Stress (root) | 0.600 |
| SRR2967015 | Control (root) | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.092 |
| SRR9715740 | Leaf | 0.131 |
| SRR9715741 | Leaf | 0.690 |
| SRR9715739 | Root | 0.813 |
| SRR9715742 | Root | 0.943 |
| SRR9715743 | Root | 0.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 257.026 |
| SRR8749028 | MeJA induced 9h | 647.759 |
| SRR8749029 | MeJA induced 9h | 627.130 |
| SRR8749030 | Uninduced | 1024.705 |
| SRR8749031 | Uninduced | 1097.442 |
| SRR8749032 | Uninduced | 722.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.613 |
| SRR8400027 | Control - Root | 9.592 |