Gene detail information of Glyur001516s00037333.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23230.1 | 9.00E-20 | Integrase-type DNA-binding superfamily protein |
| NR | NP_001238476.1 | 1.89E-57 | uncharacterized protein LOC100500462 [Glycine max] |
| Swissprot | tr|Q9LTC5|ERF98_ARATH | 1.00E-36 | Ethylene-responsive transcription factor ERF098 |
| trEMBL | tr|C6T1T9|C6T1T9_SOYBN | 7.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01516 | 56513 | 57165 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001516s00037333.1 | PF00847.15 | AP2 | 16 | 67 | 4.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.055 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 1.452 |
| SRR1811619 | moderate drought stress | 1.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.329 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.027 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.507 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.186 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.992 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.256 |
| SRR2868004 | Drought Stress (root) | 23.988 |
| SRR2967015 | Control (root) | 12.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.931 |
| SRR9715740 | Leaf | 1.831 |
| SRR9715741 | Leaf | 28.589 |
| SRR9715739 | Root | 0.440 |
| SRR9715742 | Root | 1.546 |
| SRR9715743 | Root | 2.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.626 |
| SRR8749028 | MeJA induced 9h | 1.719 |
| SRR8749029 | MeJA induced 9h | 1.259 |
| SRR8749030 | Uninduced | 8.518 |
| SRR8749031 | Uninduced | 10.042 |
| SRR8749032 | Uninduced | 9.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.529 |
| SRR8400027 | Control - Root | 5.225 |