Gene detail information of Glyur001515s00043442 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57200.1 | 3.00E-12 | |
| NR | DAA46569.1 | 1.62E-13 | TPA: hypothetical protein ZEAMMB73_720041 [Zea mays] |
| Swissprot | tr|Q5XV99|GLYT7_ARATH | 6.00E-14 | Glycosyltransferase-like At3g57200 {ECO:0000305} (Precursor) |
| trEMBL | tr|A0A096T7U0|A0A096T7U0_MAIZE | 6.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G321940_P05} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01515 | 34179 | 35261 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.982 |
| SRR1783600 | control | 3.014 |
| SRR1783602 | moderate drought stress | 5.307 |
| SRR1811619 | moderate drought stress | 5.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.871 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.678 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.238 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.833 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.961 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.460 |
| SRR2868004 | Drought Stress (root) | 5.007 |
| SRR2967015 | Control (root) | 7.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.964 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.040 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.585 |
| SRR9715743 | Root | 0.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.423 |
| SRR8749028 | MeJA induced 9h | 5.245 |
| SRR8749029 | MeJA induced 9h | 2.792 |
| SRR8749030 | Uninduced | 2.524 |
| SRR8749031 | Uninduced | 1.104 |
| SRR8749032 | Uninduced | 2.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.885 |
| SRR8400027 | Control - Root | 5.379 |