Gene detail information of Glyur001511s00039606 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06900.1 | 4.00E-54 | cytochrome P450, family 93, subfamily D, polypeptide 1 |
| NR | P93149.2 | 0 | RecName: Full=Licodione synthase; AltName: Full=(2S)-flavanone 2-hydroxylase; AltName: Full=CYP GE-5; AltName: Full=Cytochrome P450 93B1; AltName: Full=Flavone synthase II [Glycyrrhiza echinata] |
| Swissprot | tr|P93149|C93B1_GLYEC | 0 | Licodione synthase |
| trEMBL | tr|Q9MBE8|Q9MBE8_GLYEC | 0 | Cytochrome P450 {ECO:0000313|EMBL:BAA74466.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01511 | 66398 | 67294 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP93D1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001511s00039606.1 | PF00067.17 | p450 | 34 | 298 | 6.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.768 |
| SRR1783600 | control | 38.847 |
| SRR1783602 | moderate drought stress | 25.669 |
| SRR1811619 | moderate drought stress | 25.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.121 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.415 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.700 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.042 |
| SRR2868004 | Drought Stress (root) | 264.664 |
| SRR2967015 | Control (root) | 215.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.614 |
| SRR9715740 | Leaf | 1.238 |
| SRR9715741 | Leaf | 1.641 |
| SRR9715739 | Root | 27.419 |
| SRR9715742 | Root | 25.715 |
| SRR9715743 | Root | 27.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.539 |
| SRR8749028 | MeJA induced 9h | 13.471 |
| SRR8749029 | MeJA induced 9h | 2.732 |
| SRR8749030 | Uninduced | 125.727 |
| SRR8749031 | Uninduced | 335.254 |
| SRR8749032 | Uninduced | 31.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 196.259 |
| SRR8400027 | Control - Root | 154.224 |