Gene detail information of Glyur001511s00039605 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07730.2 | 9.00E-37 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_004505900.1 | 1.14E-133 | PREDICTED: mitochondrial substrate carrier family protein Y-like [Cicer arietinum] |
| Swissprot | tr|Q9LQQ0|DIR25_ARATH | 5.00E-87 | Dirigent protein 25 (Precursor) |
| trEMBL | tr|I1LK76|I1LK76_SOYBN | 2.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G15310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01511 | 37200 | 38138 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001511s00039605.1 | PF03018.9 | Dirigent | 172 | 309 | 2.20E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.481 |
| SRR1783600 | control | 0.480 |
| SRR1783602 | moderate drought stress | 0.397 |
| SRR1811619 | moderate drought stress | 0.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.112 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.057 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.059 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.638 |
| SRR2868004 | Drought Stress (root) | 27.783 |
| SRR2967015 | Control (root) | 24.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.033 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.038 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.034 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.130 |
| SRR8400027 | Control - Root | 1.475 |