Gene detail

Gene detail information of Glyur001511s00039602

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06900.1	6.00E-115	cytochrome P450, family 93, subfamily D, polypeptide 1
NR	KEH30096.1	0	cytochrome P450 family flavone synthase [Medicago truncatula]
COG	YP_003950164.1	4.00E-36	cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprot	tr\|P93149\|C93B1_GLYEC	0	Licodione synthase
trEMBL	tr\|A0A072UKZ5\|A0A072UKZ5_MEDTR	0	Cytochrome P450 family flavone synthase {ECO:0000313\|EMBL:KEH30096.1}

Sequence

Transcript Sequence

>Glyur001511s00039602.1
ACCAAAACAAAACAAAATGATTTCTGATCATCAGTCCATTTTATTATCCCTCAGTCTGTTGTTCTTTGCTTTCCTTCTCCATATCCTCTCGTTGAAGAGAAACAACAAACCAAAGCCCCATTTTCGTGAGCCACCAAGCCCACCAGCACTACCCATAATTGGCCATCTCCATCTCCTCAAACCACTCGTCCATCAAGCCTTCCGCGACCTCTCCGAACAACACGGCCCTCTCGTGTTGCTTCGGCTCGGCTCGGTCCGGTTCGTCGTTGCCAGCACCCCATCACTCGCGAGAGAGTTTCTCAAGACACACGAGCTAGCATACTCTTTCCGCAAAACGAGCACCGCCATCAACACGGTCATCTACGACAACGCCACTTTTGCTTTCTCCCCTCATGGGGACTACTGGAAGTTCATCAAAAAGCTCAGCACCACAGAACTTTTGGGCAACCGAACTATTGGACAATTCCTATCCATTCGGGCCCGTGAGGTTCANGAATTCATTTGGGCCTTAGAGAACAAGTCTAAGGCCCAAGAGAGCGTGAACCTCACTCAGGAGCTCCTGAAGCTTTCCAACAACATAATATCGAAGATGATGCTGAGCATCAAGAGCTCCGGGACAGACGGCCAGGCGGAGCAGGCGAGGGCTTTGGTTCGCGAGGTGACGGAGATCTTCGGGGAATTCAACGTCTCCGATTTCATAGGAATCTTCAAGAACTTGGACCTGCAGGGTTTTAAAAAGAGAGCCATGCACATACAAAAGAGGTACGATGCTCTGTTGGAGAAGATCATCTCCGACCGCGAGGAATCGAGAAGGAAGGAAGAGGGACGTTGTGAGATTAACGGAGGAGAAGAGAAAGTGAGGGATTTTCTAGACATTTTGCTTGATTTCTCTGAGGAGAAAGATTGTGAAGTCAGCTTAACTAGAAACCACATCAAATCAGTCATATTGGATTACTTTACNGCAGCTACGGACACAACAGCCATCTCAGTGGAATGGGCAATNGCGGAACTGTTCAACAATCCAAGGGTGCTGAAGAAAGCGCAAGAGGAGGTAGACAGAGTAATTGGGAACAAAAGACTAGTGTGTGAAGCAGACAGTCCAAACCTTCCTTACATNCATGCCATCATAAAAGAGACGATGAGGCTTCACCCACCGATACCGGTGATCATGAGGAAGGGGATAGAGGACTGCGTGGTTGATGGGTACATGATACCAAAAGGCTCAATAGTCGGTGTGAACATTTGGGCCATGGGAAGGGACCCAAAAGTGTGGGAAAGCCCATTGGAGTTCAGGCCAGAGAGGTTTCTAGAAGGCGAAAAAGGGAGAGAGATAGATCTCAAAGGCCATCACTTTGAGTTGTTGCCGTTTGGTTCTGGGAGGAGGGGTTGCCCTGGAATGAATTTGGCCATGCGGGAATTGCCCGCAATAATTGGAGCATTGGTACAGTGCTTTGAGTGGAAGATGCTTGATTCCGAACGTAAGATCTTAGACCGTGGTAGAAAAATTGACATGGATGAACGGCCAGGATTGACTGTTCCTCGGGCCACTGATCTTATTTGTATTCCAGTCGCACGATTGAATAATCCCATTCCTTTTCTTCAAGTGTAGTATGAGTAGTATATATCTTTCACTTTTGGACGTCCCCTTCAGGTTTTTCTACTGTTTTTACTTATTATATACATTAATGTTACACACACACCCACCACACACCCATCACACACCCCATTTTCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01511	24639	26942	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP93D1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001511s00039602.1	PF00067.17	p450	39	490	7.20E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.033
SRR1783600	control	0.020
SRR1783602	moderate drought stress	0.088
SRR1811619	moderate drought stress	0.066

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.062
DRR006520	Root Summer glycyrrhizin high producing strain	0.061
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.191
DRR006524	Root Summer glycyrrhizin low producing strain	0.187
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.393
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.882

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.772
SRR2868004	Drought Stress (root)	2.688
SRR2967015	Control (root)	0.943

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.392
SRR9715740	Leaf	5.391
SRR9715741	Leaf	16.207
SRR9715739	Root	0.000
SRR9715742	Root	0.356
SRR9715743	Root	0.140

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.953
SRR8749028	MeJA induced 9h	17.063
SRR8749029	MeJA induced 9h	5.662
SRR8749030	Uninduced	156.415
SRR8749031	Uninduced	227.742
SRR8749032	Uninduced	30.198

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.867
SRR8400027	Control - Root	6.440