Gene detail

Gene detail information of Glyur001507s00032449

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G01310.1	9.00E-143	Phosphoglycerate mutase-like family protein
NR	XP_003554874.1	0	PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1-like isoform X1 [Glycine max]
trEMBL	tr\|A0A072U5M4\|A0A072U5M4_MEDTR	0	Phosphoglycerate mutase-like protein {ECO:0000313\|EMBL:KEH24962.1}

Sequence

Transcript Sequence

>Glyur001507s00032449.1
ATGGCGGTGGAGGAGAAGATCAAAGTCGGCGTCTGTGTAATGGAAAAGAAGGTGAAATGTGAATCCGAGTTTTGGTGGTTCGGTATCGGAGGTTCTGCGGTTTTCTCGGCGCCTATGGGACAGATTTTTGACAGGTTACAAGCGTTTGGTGAATTCGAGGTCATACATTTCGGGGACAAGGTGATCCTTGAAGATCCAATAGAGAGCTGGCCAGTATGTGATTGTTTGATTGCTTTCTATTCCTCTGGATATCCCCTCGAAAAGGCTGAGGCATATGCTGCTTTAAGGAAACCTTTCATAGTGAATGAACTGGAGCCTCAACACCTTCTTCATGACCGAAGGAAAGTATATGAGCGTCTCNAAATGTTTGGAATCCCCGTTCCAAGATATGCCCTTGTAATTAGGGAAGTCCCATACCAAGAACTGGATTACTTTATTGAGGAAGAAGATTTTGTTGAGGTTCATGGTATGCGTTTTTGGAAGCCATTCGTGGAGAAGCCTGTTGATGCTGATAACCACAGTATAATGATATATTATCCCAGTTCAGCAGGTGGAGGTATGAAGGAATTATTTAGGAAGGTTGGCAATAGGTCCAGTGAGTTCCATTCGGAGGTGCGAAGAGTGAGGCGTGAAGGCTCCTATATTTATGAGGAATTTATGCCAACTGGAGGGACAGATGTTAAGGTGTATACAGTAGGTCCTGAATATGCTCATGCTGAGGCAAGGAAGTCTCCTGTAGTTGATGGTGTTGTTATGAGAAATCCTGACGGGAAGGAAGTTAGGTATCCAGTGTTACTGACTCCTGCCGAGAAGGAAATGGCGAGAAAGGTTTGCATTGCATTCAGCCAAGCGACGACTAACCATCTTGACAAGTTCCATTGTGGATTTCTTAATAAAAATAGACAAAAACAGGCAGACAGGGGCGTGCTATTTCGCGTGAACAGTAACAACTCAAAGGGCTCAAACACTTCCGTGAAACAAGGCAGAGAAAAAACAGATAGACCCCTGAAACAGGTCAAGGAGACGCCGGCGAGCCTTTCTGTGCAAGCCGCGTCGGAAACGGAGGCCGAGAAGGCGGCGCGTGAGCAACACGCGCCGGAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01507	57022	68113	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13024	PPIP5K, VIP	EC:2.7.4.24	Phosphatidylinositol signaling system	map04070

Gene Ontology

molecular_function

GO:0005524 ATP binding

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.271
SRR1783600	control	0.301
SRR1783602	moderate drought stress	0.506
SRR1811619	moderate drought stress	0.492

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.185
DRR006520	Root Summer glycyrrhizin high producing strain	0.350
DRR006521	Root Winter glycyrrhizin high producing strain	1.036
DRR006522	Root Winter glycyrrhizin high producing strain	1.580
DRR006523	Root Summer glycyrrhizin low producing strain	0.897
DRR006524	Root Summer glycyrrhizin low producing strain	0.788
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.201
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.155

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.129
SRR2868004	Drought Stress (root)	9.593
SRR2967015	Control (root)	7.445

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.437
SRR9715740	Leaf	0.183
SRR9715741	Leaf	0.363
SRR9715739	Root	0.271
SRR9715742	Root	0.791
SRR9715743	Root	0.631

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.308
SRR8749028	MeJA induced 9h	0.593
SRR8749029	MeJA induced 9h	0.281
SRR8749030	Uninduced	0.061
SRR8749031	Uninduced	0.069
SRR8749032	Uninduced	0.217

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.371
SRR8400027	Control - Root	1.023