Gene detail

Gene detail information of Glyur001505s00031329

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G70750.1	1.00E-67	Protein of unknown function, DUF593
NR	XP_007158802.1	0	hypothetical protein PHAVU_002G183000g [Phaseolus vulgaris]
trEMBL	tr\|V7CPF2\|V7CPF2_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW30796.1}

Sequence

Transcript Sequence

>Glyur001505s00031329.1
CAAGAACATTTCTTTTCTCCNCTAAGCTCAGTCTCCTTTGGTTGTCACTCTGTTCAATTCGATTCAATCCCCCTATATCTCAAGNCTAAATAAAACAACTTGCTCTCTACTTCCGATCTACTCTTTCTTTCTCTCCCTCTCTCACTCACAGACACACCAAAATACAGTTCTGACATCTTGTCTGAAAACACTTTGTCCCTCAAAACTTCTTCTTCNCTGTCTCTCTTTCTAATATTCTAGGTGAACCCTTTTTCATTTTTGTACATAGCAAAAACAGAGAATCCACCATGGCTNCCAACAAGTTTGCAACCATGTTGCATAGAAATACCAACAAAATCACCCTTGTTCTAGTCTACGCCATCCTTGAATGGATTCTGATCATGCTCCTCCTTCTAAACTCTCTGTTTTCTTATCTGATCATAAAGTTTGCTGATTATTTTGGCCTCAAAAGGCCCTGCATATGGTGTACCAGAATCGACCACATCATAGAGCCCGGTAAAAACAAGAATTTATGCAGAGATCTTGTGTGTGAAGCTCATGCTGTTCAGATTTCCAAACTGGGTTTCTGCTCCAATCATCACAAACTGGCGGAATCAGAGGANATGTGTGAGGATTGCTCATCCTCATCTTCATCCCAACCAAATTGTGTTGGATTGTCTCAGANTTTTGGTTACTTTCCATGGATGAAGCAAATAGGAATGGTTCAGGATTCTGATGACAAGGCAATTGAGAAAGTGGAGGAGACTTTGAGGTGTTCATGCTGTGGTGTCAACCTAGACAACAGATTCTATCCTCCTTGTATTCTGATTAAGCCTTCTCTGAGCATTTTGGATTATGGAGAGAAGAAGCAGAACATGCTCAGAGAAGGTGTATTTGTGGCTGAGATTGATGAGGGCGATCACTCAGATCACAGTAGATCAGATTTTGCACTTGATCATCATGAAGATCAACAGAGCAGTGAGGAAAACAGGGAAAGTCACATGGTGTTTGAGGTTGAACAGGGTTCAGGTAGAAAAGAAGAGGAGGCAGGGGAGAGTTGTGCTTGTTCTGTGTGTGATGGTGTCAAGGAAAACGTGGCTGGTGAAATTTACAAGCTGGATTTGGGTGTAGAGAGAGCGAAAGATGAAACCTTTGAAGAGGAAACTATGAATGTAACTAAGCCAAAGGATGATGATGATGATGATCAACCTTGTGAGCAGAGGCAGAGCACTGCTCAAGTTGAGAAAACAGAGGAAATTCCACCCAAACATCTGGAGTTTCTCATTCATGGTGATGACTGCTGTTTGATTCCTGTTGAATTGGTTGACTCCACCGCCATGGAAAAAGGAAATCAAAGTAGATATAAGGNGGGGGCTGAAGGGCTCACTGAAAGTGAAGATTTTATTCTGGACTTTGGTATGAGTACTGATGCAGAANCTAAACCAGTTATTGAGAATTGGCACGTTTCTGGGGATATTGTGGCAGAATTTTCGTGTCAGGAGAANAGAAATGCCTCCAAGGCCAATGGGGTTGAATCAGCTCAGTTAAGGACCAGAGGGCAGTCCTCAGGGTTACAATTAGAAGAAAATTTGGAGCAAAATTATCAACATATGAGATTTACTCAAACAGATGAAGACTTGCCTAAGGATGACAATGTTGAAGCAAACATGGAAAGGATGATAGATGGAGAACAATGTTCAGATGTTTCCATTGGTTCTTCTGAAGATGCATCACAAATTCAGGGTGAGGAATTTGAAGCAGAAGTCTCAATTGGGACTGAAATTCCGGATCAGGAGCAAGTGGATGAGTATCAAAGCCAAGATATTCTTTTGGATTCACATCAACTCATACAAGAAGATTCATCTACTTGTTCAGTCAGATTTCATGTCCAAGATGATAGTGGTACCGGTCTTGACAAAGGTGAACAATTTTTAGAATTTAAAACCATNTCACTTGAAGTGAGAATGCCAACAGTAAGTAACCATTTGCCATCATCATCTTTGGAGNATAATGAGAATGAGGAGGAAAAAGTTCCTGACACACCCACTTCTGTGGAGAGTCTTCATCAACTGCACAATAAACTACTTCTGCTTGAGAGGAAAGAGTCAGGAACAGAAGAGTCATTGGATGGAAGTGTCACAAGTGATATGGAATGTGGTGAGATGACCATTGAGAAGCTAAAATCAGCGTTGAAATCAGAAAGGAAGGCTTTGAAAACTCTATATGCAGAACTAGAAGAAGAGAGAAATGCTTCTGCTGTAGCAGCCAACCAGACAATGGCAATGATTAATAGGCTTCAGGAAGAGAAAGCAGCAATGCAGATGGAAGCTTTGCAGTATCAGAGAATGATGGATGAACAATCTGAGTATGACCAGGAGGCTTTGCAGCTTCTGAATGAGCTCATGCTGAAGAGGGAGAAAGAGAAGCAAGAGCTAGAAAAGGAGCTTGAGGTATACAGAAAAAGGGTTCATGAATATGAGGTAAGAGAAAAGGTGATGATGNTGTCAAGAAGAGATGGTAGCATAAGGAGCAGAACTTCATCTCCCTCTTGTAGCAATGCTGAAGATAGTGACGGGTTGTCCATCGATTTGAACCACGAAGCGAAGGAAGAAAATGGCTTTCATAGCCATCAGGAATGCAGCAATCAGAACACCCCTGTAGATGCTGTCTTATATTTGGAGGAATCATTGGCAAGCTTTGAGGAAGAGAGGTTATCAATCCTAGAACAGCTGAAAGTACTGGAAGAAAAACTAGTTATATTGAATTATGAAGAGGAGCATTACTTTGATGAAACTAAATCAATGGAACATCTTTGTGAAGAGAATGGGAATGGATATCATGATCATGATGGTTACAAAGGTCATGTAAATGGGTTTGCAAATGGTAATGGAAAGCATCATCAACAAGGGAGGAAAATCATCATGGGTACAAAAGCCAAGAGGCTTCTCCCACTTTTTGATGCAATCAGTACAGAAGCAGAAGAAGATGTAGAGTTGAGCGGAGATGAACATGAGTTGGAGTTTTCCCACTTGCAAAATGGCTCAGCTCAAAAGGTTGATGTGGATAGTAAAAAGCTTGCTTTAGAAGAAGAGGTGGATAATGTTTATGAGAGACTACAGGTTCTGGAGGCAGATAGAGAGTTTCTAAAGCACTGTGTCAGCTCCTTGAGAAAAGGGGATAAAGGGTTAGATCTTCTCCAAGAGATTTTACAACATCTACGTGATCTGAGGAATGTGGATCTCAGAGTCAGGAACATGGGTGAACTTGCAGCTGCAGTGTAAAAAGTCTACATGTTAATGTTCAGCTGTACCAAAGAGATGATATTGATATAGATTTGTTACATTGGAGTTGATCCACAAGCTGCAAACCAAGCATACATGAACATATATATAAAGGACACCAATGCATCACTTCAATTTTAACAGAAAGTAAATGGGAGTTGTTCCCTAATGGAGAGGGGAGAATCCTGGTATGGTCTGTTTGATACAATGTGGTGGACAACAGAACTGAAGTCTACCCTTCTCTTCTTTGTTTTTTTTTTCTTGTTTTCTTTTGTCCAAGTAGGCCCAAATTTTTGTGGGTTGTGTCCATCATCATCACCCTTTGTGGAAAAGGAGGATGATGAGTGTATGTGCGTGTAGGCTAGTGAGGTGAAGCCATCCTGTCACTTGTATTTTGTGAGGAAAAAAACCTGACCTGGCTTGCAAAGCTGGAGAGATAAAATAATGATTCATTCCAGTGCCAGGTACATAGAGTTAGTTTATTTAGAGAGACAGAATTAGGGCCACTAGTTTTGTCGTTTTCTTACATATTTTTTTTCTTTGGTAAAGAGTAAAAGATCGAGGTAAGTAGCCTCTTTCTTTTCTCTTTCTCATCTTTTTGCATTATTGCATCCTATGAGGTTTGTTTCTTTCTGAGGAGGAAAAAGCTGAGTCACTTGTATACTACATGTATTCATTTGTAATTAATTACTATAAAAAAAAAGTGAGTGTTTGTTTATATACTGCTTG

Protein Sequence

>Glyur001505s00031329.1
MAXNKFATMLHRNTNKITLVLVYAILEWILIMLLLLNSLFSYLIIKFADYFGLKRPCIWCTRIDHIIEPGKNKNLCRDLVCEAHAVQISKLGFCSNHHKLAESEXMCEDCSSSSSSQPNCVGLSQXFGYFPWMKQIGMVQDSDDKAIEKVEETLRCSCCGVNLDNRFYPPCILIKPSLSILDYGEKKQNMLREGVFVAEIDEGDHSDHSRSDFALDHHEDQQSSEENRESHMVFEVEQGSGRKEEEAGESCACSVCDGVKENVAGEIYKLDLGVERAKDETFEEETMNVTKPKDDDDDDQPCEQRQSTAQVEKTEEIPPKHLEFLIHGDDCCLIPVELVDSTAMEKGNQSRYKXGAEGLTESEDFILDFGMSTDAEXKPVIENWHVSGDIVAEFSCQEXRNASKANGVESAQLRTRGQSSGLQLEENLEQNYQHMRFTQTDEDLPKDDNVEANMERMIDGEQCSDVSIGSSEDASQIQGEEFEAEVSIGTEIPDQEQVDEYQSQDILLDSHQLIQEDSSTCSVRFHVQDDSGTGLDKGEQFLEFKTXSLEVRMPTVSNHLPSSSLEXNENEEEKVPDTPTSVESLHQLHNKLLLLERKESGTEESLDGSVTSDMECGEMTIEKLKSALKSERKALKTLYAELEEERNASAVAANQTMAMINRLQEEKAAMQMEALQYQRMMDEQSEYDQEALQLLNELMLKREKEKQELEKELEVYRKRVHEYEVREKVMMXSRRDGSIRSRTSSPSCSNAEDSDGLSIDLNHEAKEENGFHSHQECSNQNTPVDAVLYLEESLASFEEERLSILEQLKVLEEKLVILNYEEEHYFDETKSMEHLCEENGNGYHDHDGYKGHVNGFANGNGKHHQQGRKIIMGTKAKRLLPLFDAISTEAEEDVELSGDEHELEFSHLQNGSAQKVDVDSKKLALEEEVDNVYERLQVLEADREFLKHCVSSLRKGDKGLDLLQEILQHLRDLRNVDLRVRNMGELAAAV

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01505	994	5314	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001505s00031329.1	PF04576.10	Zein-binding	622	714	3.80E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.136
SRR1783600	control	16.196
SRR1783602	moderate drought stress	16.450
SRR1811619	moderate drought stress	16.377

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.606
DRR006520	Root Summer glycyrrhizin high producing strain	25.148
DRR006521	Root Winter glycyrrhizin high producing strain	23.898
DRR006522	Root Winter glycyrrhizin high producing strain	23.241
DRR006523	Root Summer glycyrrhizin low producing strain	23.577
DRR006524	Root Summer glycyrrhizin low producing strain	23.627
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.982
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.946

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	30.772
SRR2868004	Drought Stress (root)	30.500
SRR2967015	Control (root)	29.469

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.425
SRR9715740	Leaf	5.856
SRR9715741	Leaf	6.134
SRR9715739	Root	1.209
SRR9715742	Root	9.202
SRR9715743	Root	7.764

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.505
SRR8749028	MeJA induced 9h	4.665
SRR8749029	MeJA induced 9h	1.766
SRR8749030	Uninduced	2.071
SRR8749031	Uninduced	1.615
SRR8749032	Uninduced	0.834

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.171
SRR8400027	Control - Root	27.331