Gene detail information of Glyur001502s00031893 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16380.1 | 8.00E-18 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004293392.1 | 3.82E-49 | PREDICTED: uncharacterized protein LOC101298685 [Fragaria vesca subsp. vesca] |
| trEMBL | tr|W9QDT3|W9QDT3_9ROSA | 4.00E-52 | Uncharacterized protein {ECO:0000313|EMBL:EXB29545.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01502 | 64444 | 65489 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001502s00031893.1 | PF00403.21 | HMA | 10 | 62 | 4.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.689 |
| SRR1783600 | control | 39.985 |
| SRR1783602 | moderate drought stress | 31.036 |
| SRR1811619 | moderate drought stress | 29.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.959 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.691 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.998 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 56.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.355 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 52.579 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.813 |
| SRR2868004 | Drought Stress (root) | 20.585 |
| SRR2967015 | Control (root) | 22.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.433 |
| SRR9715740 | Leaf | 41.838 |
| SRR9715741 | Leaf | 30.124 |
| SRR9715739 | Root | 17.013 |
| SRR9715742 | Root | 35.779 |
| SRR9715743 | Root | 32.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.608 |
| SRR8749028 | MeJA induced 9h | 0.123 |
| SRR8749029 | MeJA induced 9h | 0.219 |
| SRR8749030 | Uninduced | 0.219 |
| SRR8749031 | Uninduced | 0.092 |
| SRR8749032 | Uninduced | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.019 |
| SRR8400027 | Control - Root | 10.220 |