Gene detail information of Glyur001502s00031888 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47635.1 | 1.00E-27 | Pollen Ole e 1 allergen and extensin family protein |
| NR | XP_004507594.1 | 2.52E-80 | PREDICTED: uncharacterized protein LOC101497330 [Cicer arietinum] |
| trEMBL | tr|A0A072UTK3|A0A072UTK3_MEDTR | 3.00E-77 | Pollen Ole e I family allergen {ECO:0000313|EMBL:KEH32686.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01502 | 19965 | 21983 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001502s00031888.1 | PF01190.12 | Pollen_Ole_e_I | 59 | 151 | 9.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.689 |
| SRR1783600 | control | 13.697 |
| SRR1783602 | moderate drought stress | 14.494 |
| SRR1811619 | moderate drought stress | 13.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.294 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.874 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.347 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.445 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.505 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.168 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.947 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.849 |
| SRR2868004 | Drought Stress (root) | 18.560 |
| SRR2967015 | Control (root) | 22.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.251 |
| SRR9715740 | Leaf | 1.249 |
| SRR9715741 | Leaf | 0.496 |
| SRR9715739 | Root | 2.542 |
| SRR9715742 | Root | 4.978 |
| SRR9715743 | Root | 5.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.155 |
| SRR8749031 | Uninduced | 1.470 |
| SRR8749032 | Uninduced | 0.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 69.035 |
| SRR8400027 | Control - Root | 66.253 |