Gene detail information of Glyur001495s00036178 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47550.1 | 6.00E-28 | Cystatin/monellin superfamily protein |
| NR | XP_007154019.1 | 8.88E-48 | hypothetical protein PHAVU_003G084300g [Phaseolus vulgaris] |
| Swissprot | tr|Q41916|CYT5_ARATH | 4.00E-35 | Cysteine proteinase inhibitor 5 (Precursor) |
| trEMBL | tr|V7C9I3|V7C9I3_PHAVU | 3.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:ESW26013.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01495 | 59236 | 59595 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001495s00036178.1 | PF00031.16 | Cystatin | 30 | 114 | 2.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.648 |
| SRR1783600 | control | 14.399 |
| SRR1783602 | moderate drought stress | 89.647 |
| SRR1811619 | moderate drought stress | 91.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 172.688 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 166.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.736 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.360 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.758 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.996 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.677 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.903 |
| SRR2868004 | Drought Stress (root) | 6.463 |
| SRR2967015 | Control (root) | 8.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.168 |
| SRR9715740 | Leaf | 4.052 |
| SRR9715741 | Leaf | 3.538 |
| SRR9715739 | Root | 11.037 |
| SRR9715742 | Root | 22.459 |
| SRR9715743 | Root | 17.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.738 |
| SRR8749028 | MeJA induced 9h | 0.149 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.418 |
| SRR8400027 | Control - Root | 9.385 |