Gene detail information of Glyur001492s00037917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G50370.1 | 3.00E-04 | Calcineurin-like metallo-phosphoesterase superfamily protein |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01492 | 32027 | 35999 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.771 |
| SRR1783600 | control | 2.442 |
| SRR1783602 | moderate drought stress | 2.232 |
| SRR1811619 | moderate drought stress | 1.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.508 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.708 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.962 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.431 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.555 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.178 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.807 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.761 |
| SRR2868004 | Drought Stress (root) | 1.814 |
| SRR2967015 | Control (root) | 1.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.887 |
| SRR9715740 | Leaf | 15.008 |
| SRR9715741 | Leaf | 25.027 |
| SRR9715739 | Root | 5.971 |
| SRR9715742 | Root | 4.498 |
| SRR9715743 | Root | 3.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.791 |
| SRR8749028 | MeJA induced 9h | 4.676 |
| SRR8749029 | MeJA induced 9h | 12.221 |
| SRR8749030 | Uninduced | 15.682 |
| SRR8749031 | Uninduced | 23.257 |
| SRR8749032 | Uninduced | 14.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.131 |
| SRR8400027 | Control - Root | 3.956 |